The 2.0 version of rSNPBase

Variant report

Variant rs7970870
Chromosome Location chr12:42782430-42782431
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42721600-42800800 Weak transcription Psoas Muscle Psoas
3 chr12:42721600-42803600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr12:42721800-42797000 Weak transcription NHLF lung
5 chr12:42721800-42803600 Weak transcription Gastric stomach
6 chr12:42722000-42793200 Weak transcription Fetal Kidney kidney
7 chr12:42732200-42794400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:42733400-42796800 Weak transcription Brain Hippocampus Middle brain
9 chr12:42738000-42787400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr12:42759400-42783200 Weak transcription A549 lung
12 chr12:42763800-42804200 Weak transcription Colon Smooth Muscle Colon
13 chr12:42766200-42796800 Weak transcription Aorta Aorta
14 chr12:42767200-42836200 Weak transcription Esophagus oesophagus
15 chr12:42769800-42794200 Weak transcription Left Ventricle heart
16 chr12:42770000-42794000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr12:42770200-42783400 Weak transcription NHDF-Ad bronchial
18 chr12:42770200-42786600 Weak transcription HSMM muscle
19 chr12:42770200-42815800 Weak transcription Fetal Lung lung
20 chr12:42770400-42790400 Weak transcription HUVEC blood vessel
21 chr12:42770400-42795400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr12:42770400-42816600 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr12:42770600-42787200 Weak transcription GM12878-XiMat blood
24 chr12:42771000-42792600 Weak transcription HepG2 liver
25 chr12:42771000-42795000 Weak transcription HSMMtube muscle
26 chr12:42771000-42796800 Weak transcription Brain Cingulate Gyrus brain
27 chr12:42771000-42799000 Weak transcription H9 Cell Line embryonic stem cell
28 chr12:42771200-42794400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr12:42771200-42801000 Weak transcription NH-A brain
30 chr12:42771400-42783800 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr12:42771600-42783800 Weak transcription Muscle Satellite Cultured Cells --
32 chr12:42771600-42793400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr12:42771800-42803000 Weak transcription Brain Anterior Caudate brain
34 chr12:42775800-42790200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr12:42776000-42783600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr12:42776000-42792000 Weak transcription HMEC breast
37 chr12:42776200-42795400 Weak transcription Placenta Amnion Placenta Amnion
38 chr12:42776400-42787400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr12:42776400-42789400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:42776600-42783600 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr12:42777000-42802600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr12:42778000-42798200 Strong transcription Primary T regulatory cells fromperipheralblood blood
43 chr12:42778200-42785200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr12:42778200-42788600 Strong transcription Primary T cells fromperipheralblood blood
45 chr12:42778400-42785200 Strong transcription Primary B cells from peripheral blood blood
46 chr12:42778400-42786000 Strong transcription Fetal Thymus thymus
47 chr12:42778400-42789800 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr12:42778800-42785200 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr12:42779000-42798400 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr12:42779400-42789000 Strong transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015