The 2.0 version of rSNPBase

Variant report

Variant rs12229262
Chromosome Location chr12:42768202-42768203
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42721600-42769000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr12:42721600-42778600 Weak transcription Spleen Spleen
4 chr12:42721600-42800800 Weak transcription Psoas Muscle Psoas
5 chr12:42721600-42803600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr12:42721800-42769600 Weak transcription Brain Substantia Nigra brain
7 chr12:42721800-42769800 Weak transcription Brain Cingulate Gyrus brain
8 chr12:42721800-42797000 Weak transcription NHLF lung
9 chr12:42721800-42803600 Weak transcription Gastric stomach
10 chr12:42722000-42769600 Weak transcription Brain Anterior Caudate brain
11 chr12:42722000-42769600 Weak transcription Stomach Smooth Muscle stomach
12 chr12:42722000-42772600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr12:42722000-42793200 Weak transcription Fetal Kidney kidney
14 chr12:42722200-42769200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr12:42730800-42769600 Weak transcription NH-A brain
16 chr12:42731000-42768800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr12:42731400-42769600 Weak transcription Fetal Lung lung
18 chr12:42731800-42770400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr12:42732200-42781200 Weak transcription Fetal Brain Female brain
20 chr12:42732200-42794400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr12:42732400-42769600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr12:42733400-42796800 Weak transcription Brain Hippocampus Middle brain
23 chr12:42738000-42787400 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr12:42746000-42778400 Weak transcription Fetal Brain Male brain
26 chr12:42746600-42769800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr12:42747400-42768800 Weak transcription NHDF-Ad bronchial
28 chr12:42747600-42769000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr12:42750400-42768600 Weak transcription Fetal Intestine Large intestine
30 chr12:42750400-42768600 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr12:42750400-42768800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr12:42750400-42769000 Weak transcription Ovary ovary
33 chr12:42750400-42769000 Weak transcription Osteobl bone
34 chr12:42750400-42769200 Weak transcription Left Ventricle heart
35 chr12:42750400-42769400 Weak transcription Fetal Muscle Trunk muscle
36 chr12:42750400-42769600 Weak transcription HSMMtube muscle
37 chr12:42750400-42770200 Weak transcription Fetal Muscle Leg muscle
38 chr12:42750400-42770200 Weak transcription Fetal Stomach stomach
39 chr12:42750400-42770200 Weak transcription Thymus Thymus
40 chr12:42750600-42769400 Weak transcription Placenta Placenta
41 chr12:42750800-42769200 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr12:42750800-42769800 Weak transcription Muscle Satellite Cultured Cells --
43 chr12:42751400-42768600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr12:42751400-42768800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr12:42751800-42768600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr12:42752000-42768600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr12:42752000-42769400 Weak transcription Adipose Nuclei Adipose
48 chr12:42753000-42768800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr12:42753600-42769000 Weak transcription Primary T cells fromperipheralblood blood
50 chr12:42753600-42776200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015