The 2.0 version of rSNPBase

Variant report

Variant rs7975971
Chromosome Location chr12:42788721-42788722
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42721600-42800800 Weak transcription Psoas Muscle Psoas
3 chr12:42721600-42803600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr12:42721800-42797000 Weak transcription NHLF lung
5 chr12:42721800-42803600 Weak transcription Gastric stomach
6 chr12:42722000-42793200 Weak transcription Fetal Kidney kidney
7 chr12:42732200-42794400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:42733400-42796800 Weak transcription Brain Hippocampus Middle brain
9 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr12:42763800-42804200 Weak transcription Colon Smooth Muscle Colon
11 chr12:42766200-42796800 Weak transcription Aorta Aorta
12 chr12:42767200-42836200 Weak transcription Esophagus oesophagus
13 chr12:42769800-42794200 Weak transcription Left Ventricle heart
14 chr12:42770000-42794000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr12:42770200-42815800 Weak transcription Fetal Lung lung
16 chr12:42770400-42790400 Weak transcription HUVEC blood vessel
17 chr12:42770400-42795400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr12:42770400-42816600 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr12:42771000-42792600 Weak transcription HepG2 liver
20 chr12:42771000-42795000 Weak transcription HSMMtube muscle
21 chr12:42771000-42796800 Weak transcription Brain Cingulate Gyrus brain
22 chr12:42771000-42799000 Weak transcription H9 Cell Line embryonic stem cell
23 chr12:42771200-42794400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr12:42771200-42801000 Weak transcription NH-A brain
25 chr12:42771600-42793400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr12:42771800-42803000 Weak transcription Brain Anterior Caudate brain
27 chr12:42775800-42790200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr12:42776000-42792000 Weak transcription HMEC breast
29 chr12:42776200-42795400 Weak transcription Placenta Amnion Placenta Amnion
30 chr12:42776400-42789400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr12:42777000-42802600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr12:42778000-42798200 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr12:42778400-42789800 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr12:42779000-42798400 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr12:42779400-42789000 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr12:42779400-42797800 Weak transcription Brain Germinal Matrix brain
37 chr12:42779800-42795000 Weak transcription Osteobl bone
38 chr12:42780200-42802800 Weak transcription Right Ventricle heart
39 chr12:42780200-42836000 Weak transcription Rectal Smooth Muscle rectum
40 chr12:42780400-42794800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr12:42780400-42795000 Weak transcription NHEK skin
42 chr12:42780400-42804200 Weak transcription K562 blood
43 chr12:42780400-42811200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr12:42780800-42789600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr12:42780800-42789800 Strong transcription Primary monocytes fromperipheralblood blood
46 chr12:42781200-42789800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr12:42781600-42793400 Weak transcription Hela-S3 cervix
48 chr12:42782000-42802000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr12:42782200-42790800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr12:42782200-42792600 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015