The 2.0 version of rSNPBase

Variant report

Variant rs58984176
Chromosome Location chr12:42816319-42816320
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr12:42767200-42836200 Weak transcription Esophagus oesophagus
4 chr12:42770400-42816600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr12:42780200-42836000 Weak transcription Rectal Smooth Muscle rectum
6 chr12:42783000-42836000 Weak transcription Lung lung
7 chr12:42785400-42836000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr12:42789600-42836200 Weak transcription Pancreas Pancrea
9 chr12:42793800-42840400 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr12:42795400-42834600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr12:42795600-42820400 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr12:42795600-42820600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr12:42795600-42825800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr12:42795600-42834400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr12:42795800-42821800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr12:42795800-42836000 Weak transcription Thymus Thymus
17 chr12:42796000-42819600 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr12:42796000-42820400 Weak transcription NHEK skin
19 chr12:42796000-42823600 Weak transcription Fetal Muscle Trunk muscle
20 chr12:42796000-42825600 Weak transcription Duodenum Mucosa Duodenum
21 chr12:42796000-42825800 Weak transcription Left Ventricle heart
22 chr12:42796000-42833200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr12:42796000-42834400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:42796000-42835000 Weak transcription HepG2 liver
25 chr12:42796000-42835800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr12:42796000-42836200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr12:42796000-42836200 Weak transcription Fetal Stomach stomach
28 chr12:42796000-42836400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr12:42796000-42838000 Weak transcription HSMMtube muscle
30 chr12:42796200-42826000 Weak transcription Stomach Smooth Muscle stomach
31 chr12:42797000-42820600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr12:42799800-42820600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr12:42799800-42825400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr12:42801200-42823200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr12:42801400-42817800 Weak transcription Dnd41 blood
36 chr12:42801400-42825800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr12:42801600-42820400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr12:42801600-42825600 Weak transcription HSMM muscle
39 chr12:42801800-42817800 Weak transcription Fetal Thymus thymus
40 chr12:42801800-42819600 Weak transcription Fetal Muscle Leg muscle
41 chr12:42802000-42821800 Weak transcription Primary B cells from peripheral blood blood
42 chr12:42802200-42821200 Weak transcription Fetal Intestine Large intestine
43 chr12:42802600-42823400 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr12:42803200-42821800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr12:42804000-42819400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr12:42804400-42825800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr12:42805600-42820600 Weak transcription Primary hematopoietic stem cells blood
48 chr12:42806800-42819400 Weak transcription Primary T cells from cord blood blood
49 chr12:42809600-42817600 Weak transcription Fetal Intestine Small intestine
50 chr12:42810400-42825400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015