Variant report

Variant	rs11197231
Chromosome Location	chr10:117235276-117235277
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10509991	0.81[CEU][hapmap];1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs10885722	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs10885725	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs10885729	0.80[EUR][1000 genomes]
rs10885730	0.80[EUR][1000 genomes]
rs10885746	0.85[CEU][hapmap];1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs10885747	0.84[ASN][1000 genomes]
rs11197189	0.82[CHB][hapmap]
rs11197216	0.81[ASN][1000 genomes]
rs11197233	1.00[CHB][hapmap]
rs11197244	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11197246	0.82[CHB][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11197247	0.81[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11197249	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs11197252	1.00[CHB][hapmap]
rs11197255	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs11197258	1.00[CHB][hapmap]
rs11197259	0.80[EUR][1000 genomes]
rs11197261	1.00[CHB][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11197286	1.00[CHB][hapmap]
rs11197293	1.00[CHB][hapmap]
rs11197294	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs11197299	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs11197301	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs11197357	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs11197369	1.00[CHB][hapmap]
rs11492805	0.82[CHB][hapmap]
rs11812371	1.00[CHB][hapmap]
rs12356944	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs12766723	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12767028	0.80[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12781537	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1336116	0.81[CEU][hapmap];1.00[CHB][hapmap];0.80[EUR][1000 genomes]
rs1536648	0.82[CEU][hapmap]
rs17802381	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs17802400	0.81[YRI][hapmap]
rs1981663	0.82[CHB][hapmap]
rs2182862	0.90[EUR][1000 genomes]
rs2420083	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2420091	1.00[CHB][hapmap]
rs2532729	0.86[CEU][hapmap];1.00[CHB][hapmap]
rs2769408	0.82[CEU][hapmap]
rs2769419	1.00[CHB][hapmap]
rs2804190	0.83[CEU][hapmap]
rs2804244	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs2901056	1.00[CHB][hapmap]
rs35594709	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3858323	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs4400711	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs4644580	1.00[CHB][hapmap]
rs6585333	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs6585346	1.00[CHB][hapmap]
rs67702987	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071124	0.82[CHB][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7089599	1.00[CHB][hapmap]
rs7093703	0.90[EUR][1000 genomes]
rs7095798	0.80[CEU][hapmap];1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs7913311	1.00[CHB][hapmap]
rs7922670	0.80[CEU][hapmap];1.00[CHB][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117233800-117235800	Weak transcription	Ovary	ovary

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