Variant report

Variant	rs11197249
Chromosome Location	chr10:117264082-117264083
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 110 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:110)

rs_ID	r²[population]
rs1005000	0.93[CEU][hapmap]
rs10509991	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10509992	0.93[CEU][hapmap]
rs10787584	0.92[CEU][hapmap]
rs10885721	0.92[CEU][hapmap]
rs10885722	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10885725	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10885729	0.82[EUR][1000 genomes]
rs10885730	0.82[EUR][1000 genomes]
rs10885738	0.93[CEU][hapmap]
rs10885746	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197189	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs11197231	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11197233	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197244	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197246	1.00[CEU][hapmap];0.82[CHB][hapmap];0.88[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197247	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197252	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs11197254	0.93[CEU][hapmap];0.89[YRI][hapmap]
rs11197255	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197258	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197259	0.82[EUR][1000 genomes]
rs11197261	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11197264	0.81[EUR][1000 genomes]
rs11197286	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197293	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197294	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197299	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197301	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs11197317	0.89[CEU][hapmap]
rs11197320	0.96[CEU][hapmap]
rs11197337	0.96[CEU][hapmap]
rs11197357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197369	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11492805	0.85[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap]
rs11812371	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs12356944	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12765024	0.96[CEU][hapmap]
rs12766723	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12767028	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12781537	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1328008	0.93[CEU][hapmap]
rs1336116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs1336117	0.93[CEU][hapmap]
rs1410305	0.93[CEU][hapmap]
rs1536648	0.93[CEU][hapmap]
rs1576150	0.92[CEU][hapmap]
rs1590733	0.96[CEU][hapmap]
rs1590734	0.96[CEU][hapmap]
rs1590736	0.96[CEU][hapmap]
rs17802381	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs17802400	0.96[CEU][hapmap];0.88[YRI][hapmap]
rs1981663	0.82[CHB][hapmap]
rs2025912	0.93[CEU][hapmap]
rs2068463	0.82[CHB][hapmap]
rs2149112	0.92[CEU][hapmap]
rs2182862	0.87[EUR][1000 genomes]
rs2250483	0.93[CEU][hapmap]
rs2420083	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2420091	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2420097	0.89[CEU][hapmap]
rs2420098	0.92[CEU][hapmap]
rs2532729	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2769371	0.93[CEU][hapmap]
rs2769375	0.92[CEU][hapmap]
rs2769378	0.96[CEU][hapmap]
rs2769392	0.93[CEU][hapmap]
rs2769396	0.93[CEU][hapmap]
rs2769398	0.96[CEU][hapmap]
rs2769403	0.96[CEU][hapmap]
rs2769408	0.93[CEU][hapmap]
rs2769416	0.93[CEU][hapmap]
rs2769418	0.92[CEU][hapmap]
rs2769419	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2769421	0.89[CEU][hapmap]
rs2784811	0.93[CEU][hapmap]
rs2784812	0.96[CEU][hapmap]
rs2804184	0.93[CEU][hapmap]
rs2804186	0.92[CEU][hapmap]
rs2804187	0.92[CEU][hapmap]
rs2804190	0.91[CEU][hapmap]
rs2804192	0.96[CEU][hapmap]
rs2804200	0.93[CEU][hapmap]
rs2804204	0.96[CEU][hapmap]
rs2804206	0.93[CEU][hapmap]
rs2804207	0.96[CEU][hapmap]
rs2804214	0.92[CEU][hapmap]
rs2804244	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2804249	0.92[CEU][hapmap]
rs28414370	0.82[EUR][1000 genomes]
rs2901056	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs35485324	0.84[ASN][1000 genomes]
rs35594709	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3858323	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4400711	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4612715	0.92[CEU][hapmap]
rs4644580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6585333	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6585346	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs67702987	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7068521	0.93[CEU][hapmap]
rs7071124	0.95[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7083621	0.89[CEU][hapmap]
rs7089599	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7093703	0.87[CEU][hapmap];0.87[EUR][1000 genomes]
rs7095798	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7911480	0.93[CEU][hapmap]
rs7913311	0.80[CEU][hapmap];1.00[CHB][hapmap]
rs7922670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9420197	0.92[CEU][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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