Variant report
| Variant | rs2068463 |
|---|---|
| Chromosome Location | chr10:117439864-117439865 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:56)
| rs_ID | r2[population] |
|---|---|
| rs1034938 | 1.00[JPT][hapmap] |
| rs10490917 | 0.82[JPT][hapmap] |
| rs10509991 | 0.82[CHB][hapmap] |
| rs10885725 | 0.82[CHB][hapmap] |
| rs11197247 | 0.82[CHB][hapmap] |
| rs11197249 | 0.82[CHB][hapmap] |
| rs11197255 | 0.82[CHB][hapmap] |
| rs11197258 | 0.82[CHB][hapmap] |
| rs11197286 | 0.82[CHB][hapmap];1.00[YRI][hapmap] |
| rs11197293 | 0.82[CHB][hapmap] |
| rs11197294 | 0.82[CHB][hapmap];1.00[YRI][hapmap] |
| rs11197299 | 0.82[CHB][hapmap] |
| rs11197301 | 0.82[CHB][hapmap] |
| rs11197357 | 0.82[CHB][hapmap] |
| rs11197369 | 0.82[CHB][hapmap] |
| rs11197409 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs11197416 | 1.00[JPT][hapmap];0.89[ASN][1000 genomes] |
| rs11492805 | 1.00[YRI][hapmap] |
| rs11812371 | 0.82[CHB][hapmap] |
| rs12356944 | 0.82[CHB][hapmap] |
| rs12767028 | 0.82[CHB][hapmap] |
| rs1336116 | 0.82[CHB][hapmap] |
| rs17802381 | 0.82[CHB][hapmap] |
| rs1981663 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2254619 | 1.00[JPT][hapmap] |
| rs2420106 | 1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs2420114 | 1.00[JPT][hapmap] |
| rs2420117 | 0.82[JPT][hapmap] |
| rs2532718 | 0.89[ASN][1000 genomes] |
| rs2532721 | 0.83[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs2532724 | 0.89[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs2532729 | 0.82[CHB][hapmap] |
| rs2769419 | 0.82[CHB][hapmap] |
| rs2804146 | 1.00[CHB][hapmap];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs2804157 | 0.81[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs2804159 | 0.89[ASN][1000 genomes] |
| rs2804164 | 1.00[JPT][hapmap] |
| rs2804244 | 0.82[CHB][hapmap] |
| rs2901056 | 0.82[CHB][hapmap] |
| rs2907543 | 0.82[JPT][hapmap] |
| rs2907557 | 0.82[JPT][hapmap] |
| rs2960657 | 0.82[JPT][hapmap] |
| rs2960688 | 0.82[JPT][hapmap] |
| rs2960690 | 0.82[JPT][hapmap] |
| rs2960722 | 0.82[JPT][hapmap] |
| rs4400711 | 0.82[CHB][hapmap] |
| rs4644580 | 0.82[CHB][hapmap] |
| rs6585346 | 0.82[CHB][hapmap] |
| rs6585363 | 0.82[JPT][hapmap] |
| rs6585364 | 0.82[JPT][hapmap] |
| rs67121540 | 0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs7089599 | 0.82[CHB][hapmap] |
| rs7095798 | 0.82[CHB][hapmap] |
| rs72826811 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7913311 | 0.82[CHB][hapmap] |
| rs7922670 | 0.82[CHB][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117432800-117440600 | Weak transcription | Aorta | Aorta |
| 2 | chr10:117439600-117440200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
