Variant report

Variant	rs10490917
Chromosome Location	chr10:117533520-117533521
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs11197416	1.00[CHB][hapmap]
rs11592116	0.80[ASN][1000 genomes]
rs11598532	0.80[ASN][1000 genomes]
rs12360079	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1476795	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs1541466	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs1544543	0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.80[ASN][1000 genomes]
rs1547947	0.87[CEU][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17093700	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs17269525	0.85[JPT][hapmap]
rs17354680	0.85[JPT][hapmap]
rs1860402	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1981662	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2024179	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs2068463	0.82[JPT][hapmap]
rs2244439	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2254619	1.00[CHB][hapmap]
rs2420106	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2420114	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2420117	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2420118	0.87[EUR][1000 genomes]
rs2420120	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2420123	0.85[EUR][1000 genomes]
rs2490719	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532701	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532704	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2804146	1.00[CHB][hapmap]
rs2804164	0.81[CEU][hapmap];0.84[EUR][1000 genomes]
rs2804165	0.81[CEU][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2804166	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2860341	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2860364	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2901061	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2901094	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2907525	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2907543	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2907557	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs2907560	0.83[EUR][1000 genomes]
rs2907562	0.85[EUR][1000 genomes]
rs2907571	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2907574	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2907579	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2907581	0.80[ASN][1000 genomes]
rs2960641	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2960656	0.80[ASN][1000 genomes]
rs2960657	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs2960669	0.90[EUR][1000 genomes]
rs2960673	0.87[EUR][1000 genomes]
rs2960674	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs2960684	0.85[YRI][hapmap]
rs2960685	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960686	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960688	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960689	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960690	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2960692	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2960722	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3110773	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6585361	0.86[EUR][1000 genomes]
rs6585363	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6585364	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72830991	0.80[ASN][1000 genomes]
rs72830992	0.80[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117531000-117534400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr10:117531200-117534400	Enhancers	NHDF-Ad	bronchial
3	chr10:117531200-117534600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr10:117531200-117534600	Enhancers	HSMM	muscle
5	chr10:117531200-117534800	Enhancers	Muscle Satellite Cultured Cells	--
6	chr10:117531600-117533800	Enhancers	NHLF	lung
7	chr10:117532200-117533800	Enhancers	HSMMtube	muscle
8	chr10:117532400-117533600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr10:117532800-117534400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:117532800-117534400	Enhancers	NH-A	brain
11	chr10:117532800-117534400	Enhancers	Osteobl	bone
12	chr10:117532800-117534800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr10:117532800-117534800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr10:117533000-117534200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr10:117533200-117534000	Enhancers	Aorta	Aorta
16	chr10:117533400-117535000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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