Variant report

Variant	rs2804165
Chromosome Location	chr10:117492507-117492508
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs1034938	0.92[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes]
rs10490917	0.81[CEU][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10787611	0.85[CHB][hapmap]
rs10787612	0.85[CHB][hapmap]
rs12360079	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1541466	0.86[TSI][hapmap]
rs1547947	0.83[TSI][hapmap]
rs1860402	0.94[ASW][hapmap];1.00[CEU][hapmap];0.84[GIH][hapmap];0.93[LWK][hapmap];0.94[MKK][hapmap];0.96[TSI][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1981662	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2024179	0.86[TSI][hapmap]
rs2244439	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2249295	0.85[CHB][hapmap]
rs2420114	0.83[EUR][1000 genomes]
rs2490719	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2532701	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2532704	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2615870	0.85[CHB][hapmap]
rs2615874	0.85[CHB][hapmap]
rs2615884	0.85[CHB][hapmap]
rs2615889	1.00[CHB][hapmap]
rs2620961	0.84[CHB][hapmap];0.89[CHD][hapmap]
rs2804164	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[CHD][hapmap];0.96[TSI][hapmap];0.86[EUR][1000 genomes]
rs2804166	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2860341	0.87[CEU][hapmap];0.96[TSI][hapmap];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2901061	0.90[TSI][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2907525	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2907543	0.87[CEU][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2907560	1.00[CHB][hapmap]
rs2960641	0.87[CEU][hapmap];0.96[TSI][hapmap];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2960674	0.86[TSI][hapmap]
rs2960686	0.86[TSI][hapmap]
rs2960689	0.90[TSI][hapmap]
rs2960690	0.81[CEU][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2960692	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2960722	0.88[CEU][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6585363	0.84[EUR][1000 genomes]
rs6585364	0.84[EUR][1000 genomes]
rs7100412	0.85[CHB][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117489400-117520800	Weak transcription	HSMM	muscle
2	chr10:117490800-117509600	Weak transcription	Aorta	Aorta

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