Variant report

Variant	rs2960692
Chromosome Location	chr10:117526561-117526562
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10490917	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11592116	0.80[ASN][1000 genomes]
rs11598532	0.80[ASN][1000 genomes]
rs12360079	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1476795	0.80[ASN][1000 genomes]
rs1541466	0.81[EUR][1000 genomes]
rs1544543	0.80[ASN][1000 genomes]
rs1547947	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17093700	0.84[ASN][1000 genomes]
rs1860402	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1981662	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2024179	0.81[EUR][1000 genomes]
rs2244439	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2420114	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2420117	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2420118	0.84[EUR][1000 genomes]
rs2420120	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2420123	0.81[EUR][1000 genomes]
rs2490719	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532701	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532704	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2804164	0.83[EUR][1000 genomes]
rs2804165	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2804166	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2860341	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2860364	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2901061	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2907525	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2907543	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2907557	0.80[EUR][1000 genomes]
rs2907562	0.81[EUR][1000 genomes]
rs2907571	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2907574	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2907579	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2907581	0.80[ASN][1000 genomes]
rs2960641	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2960656	0.80[ASN][1000 genomes]
rs2960657	0.80[ASN][1000 genomes]
rs2960669	0.86[EUR][1000 genomes]
rs2960673	0.85[EUR][1000 genomes]
rs2960674	0.81[EUR][1000 genomes]
rs2960685	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960686	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960688	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960689	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960690	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2960722	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3110773	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6585361	0.83[EUR][1000 genomes]
rs6585363	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6585364	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72830991	0.80[ASN][1000 genomes]
rs72830992	0.80[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117525600-117527000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr10:117525800-117527000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr10:117526400-117527000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:117526400-117531200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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