Variant report
| Variant | rs1034938 |
|---|---|
| Chromosome Location | chr10:117489198-117489199 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:28)
| rs_ID | r2[population] |
|---|---|
| rs10787611 | 1.00[CHB][hapmap] |
| rs10787612 | 1.00[CHB][hapmap] |
| rs11197416 | 1.00[JPT][hapmap] |
| rs12260062 | 0.85[YRI][hapmap] |
| rs1860402 | 0.92[CEU][hapmap];0.84[EUR][1000 genomes] |
| rs1981662 | 0.82[EUR][1000 genomes] |
| rs1981663 | 1.00[JPT][hapmap] |
| rs2068463 | 1.00[JPT][hapmap] |
| rs2244439 | 0.84[EUR][1000 genomes] |
| rs2249295 | 1.00[CHB][hapmap] |
| rs2254619 | 1.00[JPT][hapmap] |
| rs2420106 | 1.00[JPT][hapmap] |
| rs2420114 | 1.00[JPT][hapmap] |
| rs2490719 | 0.82[EUR][1000 genomes] |
| rs2532704 | 0.82[EUR][1000 genomes] |
| rs2615870 | 1.00[CHB][hapmap] |
| rs2615874 | 1.00[CHB][hapmap] |
| rs2615884 | 1.00[CHB][hapmap] |
| rs2615889 | 1.00[CHB][hapmap] |
| rs2620960 | 0.85[CHB][hapmap] |
| rs2620961 | 1.00[CHB][hapmap] |
| rs2804164 | 0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs2804165 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes] |
| rs2804166 | 0.81[EUR][1000 genomes] |
| rs2860341 | 0.82[EUR][1000 genomes] |
| rs2907560 | 1.00[CHB][hapmap] |
| rs2960641 | 0.82[EUR][1000 genomes] |
| rs7100412 | 1.00[CHB][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117471000-117490600 | Weak transcription | Aorta | Aorta |
