Variant report

Variant	rs2420106
Chromosome Location	chr10:117459598-117459599
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1034938	1.00[JPT][hapmap]
rs10490917	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs11197299	1.00[YRI][hapmap]
rs11197357	1.00[YRI][hapmap]
rs11197369	1.00[YRI][hapmap]
rs11197409	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11197416	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1476795	1.00[CHB][hapmap]
rs1541466	1.00[CHB][hapmap]
rs1544543	1.00[CHB][hapmap]
rs17093700	1.00[CHB][hapmap]
rs1860402	1.00[CHB][hapmap]
rs1981663	0.91[CEU][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2024179	1.00[CHB][hapmap]
rs2068463	1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2254619	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2420114	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2420117	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2532718	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532721	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532724	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2804146	0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2804157	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2804159	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2804164	1.00[JPT][hapmap]
rs2860341	1.00[CHB][hapmap]
rs2901061	1.00[CHB][hapmap]
rs2901094	1.00[CHB][hapmap]
rs2907543	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2907557	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2960641	1.00[CHB][hapmap]
rs2960657	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2960674	1.00[CHB][hapmap]
rs2960686	1.00[CHB][hapmap]
rs2960688	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2960689	1.00[CHB][hapmap]
rs2960690	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2960722	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs6585363	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs6585364	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs67121540	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72826811	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117447000-117465600	Weak transcription	HSMM	muscle

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