Variant report

Variant	rs2804146
Chromosome Location	chr10:117438120-117438121
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117431278..117433069-chr10:117437187..117438909,2	MCF-7	breast:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10490917	1.00[CHB][hapmap]
rs11197409	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11197416	0.81[CEU][hapmap];1.00[CHB][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1476795	1.00[CHB][hapmap]
rs1541466	1.00[CHB][hapmap]
rs1544543	1.00[CHB][hapmap]
rs17093700	1.00[CHB][hapmap]
rs1860402	1.00[CHB][hapmap]
rs1981663	0.86[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2024179	1.00[CHB][hapmap]
rs2068463	1.00[CHB][hapmap];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2254619	0.81[CEU][hapmap];1.00[CHB][hapmap]
rs2420106	0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2420114	1.00[CHB][hapmap]
rs2420117	1.00[CHB][hapmap]
rs2532718	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2532721	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2532724	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2804149	0.85[YRI][hapmap]
rs2804157	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2804159	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2860341	1.00[CHB][hapmap]
rs2901061	1.00[CHB][hapmap]
rs2907543	1.00[CHB][hapmap]
rs2907557	1.00[CHB][hapmap]
rs2960641	1.00[CHB][hapmap]
rs2960657	1.00[CHB][hapmap]
rs2960674	1.00[CHB][hapmap]
rs2960686	1.00[CHB][hapmap]
rs2960688	1.00[CHB][hapmap]
rs2960689	1.00[CHB][hapmap]
rs2960690	1.00[CHB][hapmap]
rs2960722	1.00[CHB][hapmap]
rs6585363	1.00[CHB][hapmap]
rs6585364	1.00[CHB][hapmap]
rs67121540	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72826811	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117432800-117440600	Weak transcription	Aorta	Aorta

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