The 2.0 version of rSNPBase

Variant report

Variant rs11208985
Chromosome Location chr1:67464666-67464667
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67400600-67466600 Weak transcription Aorta Aorta
2 chr1:67420600-67467000 Weak transcription Gastric stomach
3 chr1:67432000-67465600 Weak transcription Pancreas Pancrea
4 chr1:67432000-67468600 Weak transcription Lung lung
5 chr1:67441600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:67443400-67466800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:67445400-67483800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:67447200-67467400 Weak transcription Stomach Mucosa stomach
9 chr1:67447600-67466200 Weak transcription Rectal Smooth Muscle rectum
10 chr1:67447600-67466600 Weak transcription Psoas Muscle Psoas
11 chr1:67447600-67470200 Strong transcription Rectal Mucosa Donor 29 rectum
12 chr1:67448000-67470800 Weak transcription Brain Angular Gyrus brain
13 chr1:67448800-67466800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:67448800-67468600 Weak transcription HSMMtube muscle
15 chr1:67448800-67470800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:67448800-67484200 Weak transcription Brain Cingulate Gyrus brain
17 chr1:67449200-67467400 Weak transcription Fetal Brain Female brain
18 chr1:67449400-67467000 Weak transcription K562 blood
19 chr1:67449400-67501800 Weak transcription Placenta Amnion Placenta Amnion
20 chr1:67449800-67475600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:67450600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:67450800-67470600 Weak transcription Brain Anterior Caudate brain
23 chr1:67451000-67467600 Weak transcription Brain Hippocampus Middle brain
24 chr1:67451200-67506200 Weak transcription Hela-S3 cervix
25 chr1:67452400-67468400 Weak transcription NHLF lung
26 chr1:67452800-67471200 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr1:67453200-67473200 Weak transcription Colonic Mucosa Colon
28 chr1:67453200-67484000 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr1:67454800-67483200 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:67454800-67484200 Weak transcription NHDF-Ad bronchial
31 chr1:67455000-67467000 Weak transcription Fetal Kidney kidney
32 chr1:67455000-67484000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:67455000-67484200 Weak transcription GM12878-XiMat blood
34 chr1:67455200-67467800 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:67455200-67495000 Weak transcription Small Intestine intestine
36 chr1:67455400-67465800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:67455400-67468800 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:67455400-67509400 Weak transcription Spleen Spleen
39 chr1:67455600-67467000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:67455600-67468600 Weak transcription Primary T cells fromperipheralblood blood
41 chr1:67455600-67484200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:67455800-67478200 Strong transcription Liver Liver
43 chr1:67455800-67485600 Weak transcription HMEC breast
44 chr1:67456000-67467400 Weak transcription Brain Germinal Matrix brain
45 chr1:67456200-67465600 Weak transcription Thymus Thymus
46 chr1:67456200-67466400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr1:67456200-67475600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:67456400-67468000 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr1:67456400-67484800 Weak transcription HUVEC blood vessel
50 chr1:67458400-67465600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015