The 2.0 version of rSNPBase

Variant report

Variant rs3008861
Chromosome Location chr1:67396222-67396223
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67394600-67396800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr1:67395000-67396600 Active TSS Fetal Brain Male brain
3 chr1:67395000-67397200 Active TSS Brain Cingulate Gyrus brain
4 chr1:67395000-67397400 Active TSS Pancreatic Islets Pancreatic Islet
5 chr1:67395000-67398800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:67395000-67401400 Active TSS K562 blood
7 chr1:67395200-67397000 Active TSS Brain Anterior Caudate brain
8 chr1:67395200-67397000 Active TSS Fetal Lung lung
9 chr1:67395200-67397000 Active TSS Fetal Muscle Trunk muscle
10 chr1:67395200-67397400 Active TSS Fetal Kidney kidney
11 chr1:67395200-67397400 Active TSS Fetal Stomach stomach
12 chr1:67395200-67397400 Active TSS Psoas Muscle Psoas
13 chr1:67395200-67397400 Active TSS Sigmoid Colon Sigmoid Colon
14 chr1:67395200-67397400 Active TSS Small Intestine intestine
15 chr1:67395200-67397600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:67395200-67397600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
17 chr1:67395200-67397600 Active TSS Right Ventricle heart
18 chr1:67395200-67397600 Active TSS Thymus Thymus
19 chr1:67395200-67397800 Active TSS H9 Cell Line embryonic stem cell
20 chr1:67395200-67397800 Active TSS Fetal Intestine Large intestine
21 chr1:67395200-67398000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:67395200-67398000 Active TSS HUES6 Cell Line embryonic stem cell
23 chr1:67395200-67398200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:67395200-67398400 Active TSS ES-I3 Cell Line embryonic stem cell
25 chr1:67395200-67398600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:67395200-67398600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:67395400-67396600 Active TSS Primary T helper cells fromperipheralblood blood
28 chr1:67395400-67396800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:67395400-67396800 Active TSS Esophagus oesophagus
30 chr1:67395400-67396800 Active TSS Left Ventricle heart
31 chr1:67395400-67396800 Active TSS Lung lung
32 chr1:67395400-67396800 Active TSS Pancreas Pancrea
33 chr1:67395400-67396800 Active TSS Placenta Amnion Placenta Amnion
34 chr1:67395400-67397000 Active TSS ES-WA7 Cell Line embryonic stem cell
35 chr1:67395400-67397000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:67395400-67397000 Active TSS Brain Substantia Nigra brain
37 chr1:67395400-67397200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:67395400-67397200 Active TSS iPS-20b Cell Line embryonic stem cell
39 chr1:67395400-67397200 Active TSS Brain Hippocampus Middle brain
40 chr1:67395400-67397200 Active TSS Rectal Mucosa Donor 29 rectum
41 chr1:67395400-67397400 Active TSS HUES64 Cell Line embryonic stem cell
42 chr1:67395400-67397400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:67395400-67397400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:67395400-67397400 Active TSS Primary T killer naive cells fromperipheralblood blood
45 chr1:67395400-67397400 Active TSS Muscle Satellite Cultured Cells --
46 chr1:67395400-67397400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:67395400-67397400 Active TSS Right Atrium heart
48 chr1:67395400-67397400 Active TSS HSMM muscle
49 chr1:67395400-67397400 Active TSS HSMMtube muscle
50 chr1:67395400-67397600 Active TSS Aorta Aorta

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Last update: Aug 31, 2015