Variant report

Variant rs3008853
Chromosome Location chr1:67385488-67385489
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67348400-67389000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr1:67349400-67389600 Weak transcription Aorta Aorta
3 chr1:67352800-67385600 Weak transcription Ovary ovary
4 chr1:67359400-67389600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:67364000-67385800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:67364000-67389000 Weak transcription Osteobl bone
7 chr1:67364800-67388800 Weak transcription NHDF-Ad bronchial
8 chr1:67366600-67389000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:67369600-67385600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:67377200-67389200 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:67379200-67388600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr1:67380000-67388800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:67380400-67387600 Weak transcription HepG2 liver
14 chr1:67382200-67388800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:67382200-67389000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:67382200-67389200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:67382400-67385600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:67382400-67389200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:67382600-67388800 Weak transcription Brain Anterior Caudate brain
20 chr1:67382800-67385800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:67383000-67385600 Weak transcription Primary B cells from cord blood blood
22 chr1:67383000-67389000 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:67383200-67388000 Enhancers Rectal Mucosa Donor 31 rectum
24 chr1:67383200-67388800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:67383400-67387600 Weak transcription K562 blood
26 chr1:67383400-67388800 Weak transcription Fetal Brain Male brain
27 chr1:67383400-67389200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:67383600-67386200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:67383600-67387800 Weak transcription Primary T cells from cord blood blood
30 chr1:67383800-67388200 Weak transcription Fetal Heart heart
31 chr1:67383800-67389000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:67384000-67389000 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr1:67384200-67386400 Enhancers Sigmoid Colon Sigmoid Colon
34 chr1:67384400-67388800 Weak transcription Brain Cingulate Gyrus brain
35 chr1:67384400-67389200 Weak transcription Primary hematopoietic stem cells blood
36 chr1:67384400-67389600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:67384600-67385600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:67384600-67388600 Weak transcription Brain Angular Gyrus brain
39 chr1:67384600-67388800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr1:67384600-67389000 Weak transcription Duodenum Mucosa Duodenum
41 chr1:67384800-67385600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:67384800-67385600 Enhancers Fetal Intestine Large intestine
43 chr1:67384800-67389000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:67384800-67389200 Weak transcription Placenta Placenta
45 chr1:67385000-67386600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:67385000-67387600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:67385000-67388800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:67385200-67386400 Strong transcription Brain Germinal Matrix brain
49 chr1:67385200-67386400 Enhancers Colonic Mucosa Colon
50 chr1:67385200-67388000 Weak transcription Skeletal Muscle Female skeletal muscle

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