The 2.0 version of rSNPBase

Variant report

Variant rs12044492
Chromosome Location chr1:67461667-67461668
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67400600-67466600 Weak transcription Aorta Aorta
2 chr1:67414600-67462000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:67417000-67462000 Weak transcription Right Ventricle heart
4 chr1:67420600-67467000 Weak transcription Gastric stomach
5 chr1:67432000-67465600 Weak transcription Pancreas Pancrea
6 chr1:67432000-67468600 Weak transcription Lung lung
7 chr1:67441600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:67443400-67466800 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:67445400-67483800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:67447200-67467400 Weak transcription Stomach Mucosa stomach
11 chr1:67447600-67466200 Weak transcription Rectal Smooth Muscle rectum
12 chr1:67447600-67466600 Weak transcription Psoas Muscle Psoas
13 chr1:67447600-67470200 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr1:67448000-67470800 Weak transcription Brain Angular Gyrus brain
15 chr1:67448800-67462000 Weak transcription NHEK skin
16 chr1:67448800-67466800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:67448800-67468600 Weak transcription HSMMtube muscle
18 chr1:67448800-67470800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:67448800-67484200 Weak transcription Brain Cingulate Gyrus brain
20 chr1:67449200-67467400 Weak transcription Fetal Brain Female brain
21 chr1:67449400-67467000 Weak transcription K562 blood
22 chr1:67449400-67501800 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:67449800-67475600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:67450600-67464600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:67450600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:67450800-67470600 Weak transcription Brain Anterior Caudate brain
27 chr1:67451000-67467600 Weak transcription Brain Hippocampus Middle brain
28 chr1:67451200-67506200 Weak transcription Hela-S3 cervix
29 chr1:67452400-67468400 Weak transcription NHLF lung
30 chr1:67452600-67462400 Weak transcription A549 lung
31 chr1:67452800-67471200 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr1:67453000-67464600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr1:67453200-67473200 Weak transcription Colonic Mucosa Colon
34 chr1:67453200-67484000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:67454000-67463800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:67454800-67483200 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:67454800-67484200 Weak transcription NHDF-Ad bronchial
38 chr1:67455000-67467000 Weak transcription Fetal Kidney kidney
39 chr1:67455000-67484000 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:67455000-67484200 Weak transcription GM12878-XiMat blood
41 chr1:67455200-67461800 Weak transcription Dnd41 blood
42 chr1:67455200-67464200 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr1:67455200-67464400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:67455200-67464600 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:67455200-67467800 Weak transcription Muscle Satellite Cultured Cells --
46 chr1:67455200-67495000 Weak transcription Small Intestine intestine
47 chr1:67455400-67462200 Weak transcription Fetal Lung lung
48 chr1:67455400-67465800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:67455400-67468800 Weak transcription Primary monocytes fromperipheralblood blood
50 chr1:67455400-67509400 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015