Variant report

Variant	rs11211986
Chromosome Location	chr11:106821725-106821726
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11211974	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211976	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211977	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211979	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211980	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211982	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211983	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11211988	0.86[ASN][1000 genomes]
rs11211991	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1455600	0.84[EUR][1000 genomes]
rs17574208	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1944208	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1944211	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1982496	0.87[EUR][1000 genomes]
rs2226874	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2510596	0.88[EUR][1000 genomes]
rs2510599	0.86[EUR][1000 genomes]
rs2513109	0.86[EUR][1000 genomes]
rs2513142	0.84[EUR][1000 genomes]
rs4523665	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4620686	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60433547	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs66521669	0.85[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7109634	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7116468	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7127697	0.85[EUR][1000 genomes]
rs72990356	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7938459	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531938	chr11:106760733-107156814	Enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv1818906	chr11:106786428-106831384	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106807400-106826600	Weak transcription	Fetal Lung	lung
2	chr11:106808000-106827800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr11:106809000-106830400	Weak transcription	Fetal Muscle Leg	muscle
4	chr11:106820000-106822200	Enhancers	Fetal Heart	heart
5	chr11:106821200-106827600	Weak transcription	Fetal Muscle Trunk	muscle
6	chr11:106821400-106827600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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