The 2.0 version of rSNPBase

Variant report

Variant rs1122119
Chromosome Location chr12:120186708-120186709
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:120116800-120201800 Weak transcription Fetal Heart heart
2 chr12:120143800-120211200 Weak transcription Fetal Brain Male brain
3 chr12:120149400-120224800 Weak transcription Placenta Amnion Placenta Amnion
4 chr12:120151600-120196600 Weak transcription Gastric stomach
5 chr12:120151800-120208400 Weak transcription Fetal Brain Female brain
6 chr12:120151800-120218600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr12:120154800-120209600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr12:120156600-120221400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr12:120172000-120189400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr12:120172200-120218600 Weak transcription Fetal Kidney kidney
11 chr12:120172600-120189600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr12:120173000-120194400 Weak transcription Duodenum Mucosa Duodenum
13 chr12:120173400-120188600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr12:120173600-120188800 Weak transcription NHEK skin
15 chr12:120177600-120205200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr12:120178200-120205200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr12:120178400-120202200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr12:120180000-120187800 Weak transcription Fetal Muscle Leg muscle
19 chr12:120181800-120186800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:120182000-120189800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:120182200-120187400 Weak transcription Hela-S3 cervix
22 chr12:120182600-120188600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr12:120183200-120188000 Weak transcription Primary B cells from cord blood blood
24 chr12:120183800-120189800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr12:120184000-120207600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr12:120184200-120187400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr12:120184200-120195000 Weak transcription Muscle Satellite Cultured Cells --
28 chr12:120184200-120202400 Strong transcription HUES6 Cell Line embryonic stem cell
29 chr12:120184200-120224600 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr12:120184400-120188200 Weak transcription Fetal Lung lung
31 chr12:120184400-120205200 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr12:120184600-120187400 Weak transcription HSMMtube muscle
33 chr12:120184600-120188200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr12:120184600-120189800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr12:120184600-120193600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr12:120184600-120199000 Weak transcription Primary T cells from cord blood blood
37 chr12:120184800-120187000 Weak transcription GM12878-XiMat blood
38 chr12:120184800-120191800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr12:120184800-120192400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:120184800-120205400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr12:120185000-120186800 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr12:120185400-120191000 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr12:120185400-120200400 Strong transcription Thymus Thymus
44 chr12:120185400-120227200 Strong transcription Dnd41 blood
45 chr12:120185600-120187400 Strong transcription H9 Cell Line embryonic stem cell
46 chr12:120185600-120187800 Strong transcription HepG2 liver
47 chr12:120185600-120201000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr12:120185600-120202200 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr12:120185800-120187000 Strong transcription HMEC breast
50 chr12:120185800-120189400 Strong transcription K562 blood

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Last update: Aug 31, 2015