The 2.0 version of rSNPBase

Variant report

Variant rs11225266
Chromosome Location chr11:102346586-102346587
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102338000-102347000 Weak transcription Small Intestine intestine
2 chr11:102339000-102347400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr11:102339800-102347000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr11:102340600-102346800 Weak transcription A549 lung
5 chr11:102340800-102347000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr11:102340800-102347200 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr11:102340800-102347600 Weak transcription Lung lung
8 chr11:102341000-102346800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr11:102341000-102347400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr11:102341000-102359600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr11:102341800-102347200 Weak transcription Dnd41 blood
12 chr11:102342000-102347000 Weak transcription Thymus Thymus
13 chr11:102342000-102347200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr11:102342000-102347400 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr11:102342000-102347400 Weak transcription Primary hematopoietic stem cells blood
16 chr11:102342000-102347400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr11:102342000-102347400 Weak transcription Fetal Heart heart
18 chr11:102342400-102347000 Weak transcription NHEK skin
19 chr11:102342400-102347200 Weak transcription Fetal Thymus thymus
20 chr11:102342400-102347400 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr11:102342400-102347400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr11:102342600-102346800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr11:102342800-102347000 Weak transcription HMEC breast
24 chr11:102342800-102347200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr11:102344400-102346800 Enhancers HepG2 liver
26 chr11:102344600-102347000 Weak transcription K562 blood
27 chr11:102344600-102348000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr11:102344600-102348200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr11:102345000-102347000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr11:102345000-102347200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr11:102345000-102347200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr11:102345000-102349200 Weak transcription Colonic Mucosa Colon
33 chr11:102345000-102351600 Weak transcription Gastric stomach
34 chr11:102345200-102346800 Weak transcription Rectal Smooth Muscle rectum
35 chr11:102345200-102347000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr11:102345200-102347000 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr11:102345200-102347000 Weak transcription Duodenum Mucosa Duodenum
38 chr11:102345400-102346800 Weak transcription Primary T cells from cord blood blood
39 chr11:102345400-102347200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr11:102345400-102347400 Weak transcription Fetal Lung lung
41 chr11:102345600-102346800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr11:102345600-102346800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr11:102345600-102347000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr11:102345600-102347000 Weak transcription Colon Smooth Muscle Colon
45 chr11:102345600-102347000 Weak transcription Stomach Mucosa stomach
46 chr11:102345600-102347400 Weak transcription Primary T cells fromperipheralblood blood
47 chr11:102345600-102348000 Enhancers GM12878-XiMat blood
48 chr11:102345800-102346800 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr11:102346000-102347000 Weak transcription Primary B cells from peripheral blood blood
50 chr11:102346200-102347200 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015