The 2.0 version of rSNPBase

Variant report

Variant rs17350205
Chromosome Location chr11:102296024-102296025
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102273000-102302400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr11:102273200-102300800 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr11:102277200-102297000 Weak transcription Duodenum Mucosa Duodenum
4 chr11:102278600-102300600 Weak transcription Esophagus oesophagus
5 chr11:102281400-102296400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr11:102281400-102296600 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr11:102281400-102297600 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr11:102281600-102300000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr11:102281800-102298000 Weak transcription Primary monocytes fromperipheralblood blood
10 chr11:102282200-102303400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr11:102283000-102300600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr11:102283200-102300400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr11:102284400-102299600 Weak transcription Right Atrium heart
14 chr11:102284400-102302200 Weak transcription Aorta Aorta
15 chr11:102284600-102308600 Weak transcription Lung lung
16 chr11:102286400-102297800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr11:102288200-102299000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr11:102288400-102297000 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr11:102288400-102298000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr11:102288600-102300600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr11:102288800-102296200 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr11:102288800-102300400 Weak transcription Primary B cells from peripheral blood blood
23 chr11:102289600-102297600 Enhancers Brain Substantia Nigra brain
24 chr11:102289600-102297800 Weak transcription Fetal Lung lung
25 chr11:102289800-102297400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr11:102289800-102297800 Enhancers Brain Hippocampus Middle brain
27 chr11:102289800-102298000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr11:102290200-102297400 Enhancers Brain Cingulate Gyrus brain
29 chr11:102290600-102298200 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr11:102290600-102301000 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr11:102291000-102296400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:102291000-102298200 Weak transcription H1 Cell Line embryonic stem cell
33 chr11:102291000-102299600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr11:102291000-102301600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:102291000-102303200 Weak transcription HMEC breast
36 chr11:102291200-102299000 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr11:102291200-102302400 Weak transcription NHEK skin
38 chr11:102291600-102296400 Weak transcription Stomach Mucosa stomach
39 chr11:102291600-102299600 Weak transcription Small Intestine intestine
40 chr11:102291600-102301200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:102291600-102302600 Weak transcription A549 lung
42 chr11:102291600-102307800 Weak transcription K562 blood
43 chr11:102291800-102300600 Weak transcription Fetal Intestine Small intestine
44 chr11:102292000-102297800 Weak transcription GM12878-XiMat blood
45 chr11:102292200-102299600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr11:102292400-102297000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr11:102292600-102297000 Enhancers Brain Inferior Temporal Lobe brain
48 chr11:102292600-102299600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr11:102292600-102299600 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr11:102292800-102300400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015