The 2.0 version of rSNPBase

Variant report

Variant rs11225229
Chromosome Location chr11:102236433-102236434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102219200-102238400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr11:102219200-102239200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:102220000-102283000 Weak transcription Hela-S3 cervix
4 chr11:102220800-102240000 Strong transcription Liver Liver
5 chr11:102221200-102239800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:102223800-102239800 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr11:102225600-102255400 Weak transcription Fetal Heart heart
8 chr11:102227800-102239800 Strong transcription Placenta Placenta
9 chr11:102228800-102239800 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr11:102228800-102239800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:102228800-102239800 Strong transcription Rectal Mucosa Donor 29 rectum
12 chr11:102228800-102240000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr11:102229000-102239800 Strong transcription Primary monocytes fromperipheralblood blood
14 chr11:102229400-102239600 Strong transcription Muscle Satellite Cultured Cells --
15 chr11:102229400-102239800 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr11:102229400-102239800 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr11:102229400-102239800 Strong transcription Osteobl bone
18 chr11:102229600-102237800 Strong transcription HUVEC blood vessel
19 chr11:102229600-102239800 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr11:102229600-102239800 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr11:102229800-102239800 Strong transcription Adipose Nuclei Adipose
22 chr11:102230200-102237200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr11:102230200-102239800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr11:102230400-102236800 Strong transcription Fetal Lung lung
25 chr11:102230400-102237000 Strong transcription Placenta Amnion Placenta Amnion
26 chr11:102230600-102237800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr11:102230600-102240000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr11:102230800-102237000 Strong transcription Primary hematopoietic stem cells blood
29 chr11:102230800-102240000 Strong transcription Fetal Intestine Large intestine
30 chr11:102230800-102245400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr11:102231200-102239000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr11:102231200-102240000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr11:102231400-102236600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr11:102231600-102239400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr11:102232000-102239800 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr11:102232000-102239800 Strong transcription HepG2 liver
37 chr11:102232400-102239000 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr11:102232400-102240000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr11:102232400-102245400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr11:102232400-102245400 Weak transcription H9 Cell Line embryonic stem cell
41 chr11:102232400-102259600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr11:102232600-102237000 Weak transcription Fetal Intestine Small intestine
43 chr11:102232600-102238400 Strong transcription GM12878-XiMat blood
44 chr11:102232600-102238600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr11:102232600-102239200 Weak transcription Rectal Smooth Muscle rectum
46 chr11:102232600-102239800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr11:102232600-102239800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr11:102232600-102239800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr11:102232600-102245400 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr11:102232600-102245600 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015