The 2.0 version of rSNPBase

Variant report

Variant rs1290044
Chromosome Location chr11:102227019-102227020
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102218800-102231600 Weak transcription Spleen Spleen
2 chr11:102219000-102231600 Weak transcription Gastric stomach
3 chr11:102219000-102231800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr11:102219200-102230200 Weak transcription Right Ventricle heart
5 chr11:102219200-102231600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr11:102219200-102231600 Weak transcription Esophagus oesophagus
7 chr11:102219200-102231800 Weak transcription H1 Cell Line embryonic stem cell
8 chr11:102219200-102231800 Weak transcription H9 Cell Line embryonic stem cell
9 chr11:102219200-102234400 Weak transcription Psoas Muscle Psoas
10 chr11:102219200-102234600 Weak transcription Ovary ovary
11 chr11:102219200-102238400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr11:102219200-102239200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr11:102219400-102231800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr11:102219600-102229600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr11:102219600-102230400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr11:102219600-102231600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr11:102219800-102227800 Weak transcription Fetal Brain Male brain
18 chr11:102219800-102229600 Weak transcription Primary B cells from cord blood blood
19 chr11:102220000-102229000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr11:102220000-102229600 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr11:102220000-102283000 Weak transcription Hela-S3 cervix
22 chr11:102220400-102227800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr11:102220400-102227800 Weak transcription Rectal Smooth Muscle rectum
24 chr11:102220400-102228800 Strong transcription Fetal Lung lung
25 chr11:102220400-102228800 Weak transcription Dnd41 blood
26 chr11:102220800-102229400 Weak transcription Brain Anterior Caudate brain
27 chr11:102220800-102231400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr11:102220800-102240000 Strong transcription Liver Liver
29 chr11:102221000-102229200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr11:102221000-102230200 Weak transcription Small Intestine intestine
31 chr11:102221000-102231600 Weak transcription Aorta Aorta
32 chr11:102221200-102229600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr11:102221200-102230200 Weak transcription Primary B cells from peripheral blood blood
34 chr11:102221200-102231000 Weak transcription Colon Smooth Muscle Colon
35 chr11:102221200-102231400 Weak transcription Brain Angular Gyrus brain
36 chr11:102221200-102239800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr11:102221400-102227200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr11:102221400-102227800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr11:102221400-102227800 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr11:102221400-102227800 Strong transcription Fetal Thymus thymus
41 chr11:102221400-102229200 Weak transcription NHDF-Ad bronchial
42 chr11:102221400-102230400 Weak transcription Brain Hippocampus Middle brain
43 chr11:102221400-102233200 Weak transcription HSMMtube muscle
44 chr11:102221600-102230200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr11:102221800-102229400 Weak transcription HMEC breast
46 chr11:102221800-102230400 Weak transcription Stomach Smooth Muscle stomach
47 chr11:102221800-102231600 Weak transcription NHLF lung
48 chr11:102222000-102227600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr11:102222000-102228800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr11:102222200-102229000 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015