The 2.0 version of rSNPBase

Variant report

Variant rs35569122
Chromosome Location chr11:102232348-102232349
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102219200-102234400 Weak transcription Psoas Muscle Psoas
2 chr11:102219200-102234600 Weak transcription Ovary ovary
3 chr11:102219200-102238400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr11:102219200-102239200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:102220000-102283000 Weak transcription Hela-S3 cervix
6 chr11:102220800-102240000 Strong transcription Liver Liver
7 chr11:102221200-102239800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr11:102221400-102233200 Weak transcription HSMMtube muscle
9 chr11:102222200-102234600 Weak transcription K562 blood
10 chr11:102223800-102239800 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr11:102225600-102255400 Weak transcription Fetal Heart heart
12 chr11:102227800-102239800 Strong transcription Placenta Placenta
13 chr11:102228200-102235200 Weak transcription Fetal Brain Male brain
14 chr11:102228800-102232600 Strong transcription HSMM muscle
15 chr11:102228800-102232800 Strong transcription Duodenum Smooth Muscle Duodenum
16 chr11:102228800-102233000 Strong transcription Duodenum Mucosa Duodenum
17 chr11:102228800-102233000 Strong transcription NH-A brain
18 chr11:102228800-102239800 Strong transcription HUES64 Cell Line embryonic stem cell
19 chr11:102228800-102239800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr11:102228800-102239800 Strong transcription Rectal Mucosa Donor 29 rectum
21 chr11:102228800-102240000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr11:102229000-102239800 Strong transcription Primary monocytes fromperipheralblood blood
23 chr11:102229200-102232800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr11:102229400-102232600 Strong transcription Brain Anterior Caudate brain
25 chr11:102229400-102236400 Strong transcription HMEC breast
26 chr11:102229400-102239600 Strong transcription Muscle Satellite Cultured Cells --
27 chr11:102229400-102239800 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr11:102229400-102239800 Strong transcription Rectal Mucosa Donor 31 rectum
29 chr11:102229400-102239800 Strong transcription Osteobl bone
30 chr11:102229600-102232400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr11:102229600-102232600 Strong transcription Skeletal Muscle Male skeletal muscle
32 chr11:102229600-102237800 Strong transcription HUVEC blood vessel
33 chr11:102229600-102239800 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr11:102229600-102239800 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr11:102229800-102239800 Strong transcription Adipose Nuclei Adipose
36 chr11:102230000-102232600 Strong transcription Fetal Muscle Trunk muscle
37 chr11:102230200-102232600 Strong transcription Rectal Smooth Muscle rectum
38 chr11:102230200-102237200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr11:102230200-102239800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr11:102230400-102232600 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr11:102230400-102232600 Strong transcription Brain Cingulate Gyrus brain
42 chr11:102230400-102232600 Strong transcription Brain Hippocampus Middle brain
43 chr11:102230400-102232600 Strong transcription Brain Inferior Temporal Lobe brain
44 chr11:102230400-102232800 Strong transcription Stomach Smooth Muscle stomach
45 chr11:102230400-102233400 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr11:102230400-102236000 Weak transcription Small Intestine intestine
47 chr11:102230400-102236800 Strong transcription Fetal Lung lung
48 chr11:102230400-102237000 Strong transcription Placenta Amnion Placenta Amnion
49 chr11:102230600-102232800 Strong transcription A549 lung
50 chr11:102230600-102237800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015