The 2.0 version of rSNPBase

Variant report

Variant rs57346058
Chromosome Location chr11:102303021-102303022
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102282200-102303400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:102284600-102308600 Weak transcription Lung lung
3 chr11:102291000-102303200 Weak transcription HMEC breast
4 chr11:102291600-102307800 Weak transcription K562 blood
5 chr11:102293000-102316000 Weak transcription HUVEC blood vessel
6 chr11:102293200-102303200 Weak transcription Fetal Muscle Trunk muscle
7 chr11:102294200-102303400 Weak transcription Fetal Stomach stomach
8 chr11:102294400-102303400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr11:102295400-102307600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr11:102297800-102303800 Genic enhancers HepG2 liver
11 chr11:102298200-102316000 Weak transcription Fetal Lung lung
12 chr11:102298400-102303400 Weak transcription H1 Cell Line embryonic stem cell
13 chr11:102298400-102303600 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr11:102299800-102303200 Weak transcription Dnd41 blood
15 chr11:102300400-102319800 Weak transcription Fetal Kidney kidney
16 chr11:102300800-102303200 Weak transcription Primary hematopoietic stem cells blood
17 chr11:102300800-102316600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr11:102300800-102320600 Weak transcription Ovary ovary
19 chr11:102301000-102303200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr11:102301200-102303400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr11:102301200-102303400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr11:102301200-102303600 Weak transcription Placenta Placenta
23 chr11:102301200-102303800 Weak transcription Colonic Mucosa Colon
24 chr11:102301200-102320800 Weak transcription Left Ventricle heart
25 chr11:102301400-102303400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr11:102301400-102303400 Weak transcription Primary monocytes fromperipheralblood blood
27 chr11:102301400-102303400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr11:102301400-102303400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr11:102301400-102303600 Weak transcription Liver Liver
30 chr11:102301400-102316200 Weak transcription Duodenum Mucosa Duodenum
31 chr11:102301400-102316600 Weak transcription NHLF lung
32 chr11:102301400-102319800 Weak transcription Pancreas Pancrea
33 chr11:102301400-102320600 Weak transcription Right Ventricle heart
34 chr11:102301400-102320800 Weak transcription Adipose Nuclei Adipose
35 chr11:102301400-102321000 Weak transcription Stomach Smooth Muscle stomach
36 chr11:102301400-102322400 Weak transcription Spleen Spleen
37 chr11:102301600-102303400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr11:102301600-102303400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr11:102301600-102303400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr11:102301600-102303400 Weak transcription Gastric stomach
41 chr11:102301600-102303600 Weak transcription Brain Germinal Matrix brain
42 chr11:102301600-102303800 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr11:102301600-102307400 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr11:102301600-102307600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr11:102301600-102308400 Weak transcription Rectal Smooth Muscle rectum
46 chr11:102301600-102309000 Weak transcription Muscle Satellite Cultured Cells --
47 chr11:102301600-102316600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr11:102301800-102303800 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr11:102301800-102305800 Weak transcription Brain Substantia Nigra brain
50 chr11:102301800-102306200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015