Variant report

Variant rs11241213
Chromosome Location chr5:112851088-112851089
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112848800-112851400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr5:112849000-112851200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr5:112849000-112851200 Active TSS HMEC breast
4 chr5:112849000-112851400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr5:112849000-112851400 Active TSS Pancreatic Islets Pancreatic Islet
6 chr5:112849000-112851400 Active TSS NHLF lung
7 chr5:112850000-112852000 Flanking Active TSS HUVEC blood vessel
8 chr5:112850200-112851200 Weak transcription Small Intestine intestine
9 chr5:112850200-112851200 Flanking Active TSS Dnd41 blood
10 chr5:112850400-112851200 Weak transcription Primary T cells fromperipheralblood blood
11 chr5:112850400-112851200 Weak transcription Fetal Muscle Trunk muscle
12 chr5:112850400-112851400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr5:112850400-112851600 Enhancers Primary B cells from peripheral blood blood
14 chr5:112850400-112852000 Weak transcription Fetal Thymus thymus
15 chr5:112850400-112852800 Weak transcription Fetal Lung lung
16 chr5:112850400-112853000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr5:112850400-112853000 Weak transcription HSMM muscle
18 chr5:112850400-112853200 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr5:112850400-112853200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr5:112850400-112853400 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr5:112850400-112855600 Weak transcription Left Ventricle heart
22 chr5:112850400-112856000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr5:112850400-112856200 Weak transcription Ovary ovary
24 chr5:112850400-112856200 Weak transcription Thymus Thymus
25 chr5:112850400-112857800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:112850400-112858200 Weak transcription Rectal Smooth Muscle rectum
27 chr5:112850400-112863600 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr5:112850400-112866600 Weak transcription Esophagus oesophagus
29 chr5:112850400-112866600 Weak transcription Placenta Placenta
30 chr5:112850400-112866800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr5:112850400-112866800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr5:112850400-112866800 Weak transcription H9 Cell Line embryonic stem cell
33 chr5:112850400-112866800 Weak transcription Aorta Aorta
34 chr5:112850400-112866800 Weak transcription Lung lung
35 chr5:112850400-112867000 Weak transcription Pancreas Pancrea
36 chr5:112850400-112879000 Weak transcription Placenta Amnion Placenta Amnion
37 chr5:112850400-112879200 Weak transcription Gastric stomach
38 chr5:112850400-112904000 Weak transcription Psoas Muscle Psoas
39 chr5:112850600-112851200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr5:112850600-112851200 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr5:112850600-112851200 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr5:112850600-112851200 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr5:112850600-112851200 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr5:112850600-112851200 Weak transcription Primary monocytes fromperipheralblood blood
45 chr5:112850600-112851200 Enhancers Primary B cells from cord blood blood
46 chr5:112850600-112851200 Active TSS Primary T helper cells PMA-I stimulated --
47 chr5:112850600-112851200 Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr5:112850600-112851200 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr5:112850600-112851200 Weak transcription Brain Angular Gyrus brain
50 chr5:112850600-112851200 Enhancers Brain Hippocampus Middle brain

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