The 2.0 version of rSNPBase

Variant report

Variant rs11552203
Chromosome Location chr8:59363105-59363106
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59325200-59370800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr8:59325800-59363200 Weak transcription Hela-S3 cervix
3 chr8:59326600-59366200 Weak transcription Gastric stomach
4 chr8:59332600-59364800 Weak transcription Rectal Smooth Muscle rectum
5 chr8:59334400-59364200 Weak transcription HMEC breast
6 chr8:59336000-59364800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr8:59336000-59366600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr8:59337800-59363200 Weak transcription Pancreas Pancrea
9 chr8:59339600-59363400 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr8:59342200-59366200 Weak transcription H9 Cell Line embryonic stem cell
11 chr8:59342400-59365400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr8:59349800-59370800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr8:59353400-59364600 Weak transcription Brain Anterior Caudate brain
14 chr8:59353800-59370400 Weak transcription Esophagus oesophagus
15 chr8:59354600-59364200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr8:59354800-59363200 Weak transcription Fetal Kidney kidney
17 chr8:59354800-59363200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr8:59354800-59363400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr8:59354800-59363800 Weak transcription Brain Substantia Nigra brain
20 chr8:59354800-59364000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr8:59354800-59364200 Weak transcription NHEK skin
22 chr8:59354800-59364400 Weak transcription Fetal Muscle Leg muscle
23 chr8:59354800-59364600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr8:59354800-59366200 Weak transcription Brain Angular Gyrus brain
25 chr8:59354800-59366600 Weak transcription HepG2 liver
26 chr8:59354800-59367000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr8:59354800-59370200 Weak transcription HSMM muscle
28 chr8:59355000-59363400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr8:59355200-59364200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr8:59355400-59366200 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr8:59355600-59363200 Weak transcription Brain Hippocampus Middle brain
32 chr8:59355600-59364400 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr8:59355600-59366000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr8:59355800-59369600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr8:59356000-59365800 Weak transcription Colon Smooth Muscle Colon
36 chr8:59358400-59363200 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr8:59359200-59363200 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr8:59359600-59363400 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr8:59360000-59363400 Strong transcription GM12878-XiMat blood
40 chr8:59360800-59363200 Strong transcription Primary hematopoietic stem cells blood
41 chr8:59360800-59363400 Strong transcription Primary B cells from cord blood blood
42 chr8:59361000-59363400 Strong transcription Fetal Thymus thymus
43 chr8:59361200-59366200 Weak transcription Fetal Intestine Small intestine
44 chr8:59361600-59363400 Weak transcription Duodenum Mucosa Duodenum
45 chr8:59361800-59363400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr8:59361800-59363600 Weak transcription Ovary ovary
47 chr8:59361800-59364000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr8:59361800-59364000 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr8:59361800-59364000 Weak transcription Primary B cells from peripheral blood blood
50 chr8:59361800-59364200 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015