The 2.0 version of rSNPBase

Variant report

Variant rs11597608
Chromosome Location chr10:61870003-61870004
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61792200-61883200 Weak transcription Psoas Muscle Psoas
2 chr10:61835400-61883200 Weak transcription Brain Cingulate Gyrus brain
3 chr10:61835600-61874600 Weak transcription Brain Anterior Caudate brain
4 chr10:61835600-61883000 Weak transcription Fetal Heart heart
5 chr10:61836000-61874800 Weak transcription HSMMtube muscle
6 chr10:61836000-61881800 Weak transcription Left Ventricle heart
7 chr10:61836000-61893200 Weak transcription Placenta Amnion Placenta Amnion
8 chr10:61836200-61870200 Weak transcription Fetal Stomach stomach
9 chr10:61839800-61876400 Weak transcription Fetal Muscle Trunk muscle
10 chr10:61841200-61899400 Weak transcription Right Ventricle heart
11 chr10:61846600-61888600 Weak transcription Fetal Kidney kidney
12 chr10:61848000-61874200 Weak transcription Primary T cells fromperipheralblood blood
13 chr10:61848000-61900400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr10:61848200-61874800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr10:61848400-61889800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr10:61849200-61882600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr10:61857200-61882600 Weak transcription NH-A brain
18 chr10:61857400-61889800 Weak transcription H1 Cell Line embryonic stem cell
19 chr10:61857800-61889600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr10:61859800-61889800 Weak transcription Duodenum Mucosa Duodenum
21 chr10:61859800-61900200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr10:61860000-61874800 Weak transcription Brain Hippocampus Middle brain
23 chr10:61860000-61875000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr10:61860000-61900000 Weak transcription Fetal Brain Male brain
25 chr10:61860400-61874000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr10:61860600-61883400 Weak transcription Brain Substantia Nigra brain
27 chr10:61863600-61874800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr10:61863800-61883400 Weak transcription Brain Angular Gyrus brain
29 chr10:61864600-61874800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr10:61865200-61874600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr10:61865400-61870800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr10:61865400-61874600 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr10:61865800-61876400 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr10:61866000-61874200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr10:61866400-61874400 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr10:61866400-61889800 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr10:61867000-61910200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr10:61867600-61891200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr10:61868200-61872800 Weak transcription Fetal Intestine Small intestine
40 chr10:61868200-61874200 Strong transcription Placenta Placenta
41 chr10:61868600-61874800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr10:61868800-61872400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr10:61868800-61889600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr10:61868800-61891400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr10:61868800-61893000 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr10:61869000-61871800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr10:61869000-61879600 Weak transcription Ovary ovary
48 chr10:61869000-61886600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr10:61869000-61913200 Weak transcription Primary T cells from cord blood blood
50 chr10:61869200-61882800 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015