Variant report

Variant	rs72816451
Chromosome Location	chr10:61750360-61750361
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:61744140..61747468-chr10:61749208..61752797,3	K562	blood:
2	chr10:61725526..61727186-chr10:61748882..61750864,2	MCF-7	breast:
3	chr10:61661963..61664576-chr10:61749051..61751954,2	MCF-7	breast:
4	chr10:61665530..61669084-chr10:61748934..61753425,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000108091	Chromatin interaction

Extended variants
information (count: 72 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs10994098	1.00[ASN][1000 genomes]
rs10994101	1.00[ASN][1000 genomes]
rs10994103	1.00[ASN][1000 genomes]
rs10994207	1.00[ASN][1000 genomes]
rs11592958	1.00[ASN][1000 genomes]
rs11593303	1.00[ASN][1000 genomes]
rs11597608	1.00[ASN][1000 genomes]
rs11599447	1.00[ASN][1000 genomes]
rs1171838	1.00[ASN][1000 genomes]
rs1171839	1.00[ASN][1000 genomes]
rs1171840	1.00[ASN][1000 genomes]
rs1171842	1.00[ASN][1000 genomes]
rs1171852	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1177707	1.00[ASN][1000 genomes]
rs1183348	1.00[ASN][1000 genomes]
rs1183349	1.00[ASN][1000 genomes]
rs1185329	1.00[ASN][1000 genomes]
rs12247565	1.00[ASN][1000 genomes]
rs1631669	1.00[ASN][1000 genomes]
rs1664264	1.00[ASN][1000 genomes]
rs1664266	1.00[ASN][1000 genomes]
rs1664267	1.00[ASN][1000 genomes]
rs1664271	1.00[ASN][1000 genomes]
rs1684909	1.00[ASN][1000 genomes]
rs1684910	1.00[ASN][1000 genomes]
rs1684911	1.00[ASN][1000 genomes]
rs1684912	1.00[ASN][1000 genomes]
rs1684915	1.00[ASN][1000 genomes]
rs1684923	1.00[ASN][1000 genomes]
rs1684924	1.00[ASN][1000 genomes]
rs2440915	1.00[ASN][1000 genomes]
rs2450451	1.00[ASN][1000 genomes]
rs2450452	1.00[ASN][1000 genomes]
rs34568290	1.00[ASN][1000 genomes]
rs3862858	1.00[ASN][1000 genomes]
rs41347048	1.00[ASN][1000 genomes]
rs55668813	1.00[ASN][1000 genomes]
rs56783612	1.00[ASN][1000 genomes]
rs61101067	1.00[ASN][1000 genomes]
rs61154079	1.00[ASN][1000 genomes]
rs7068392	1.00[ASN][1000 genomes]
rs7077069	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7078037	1.00[ASN][1000 genomes]
rs7090532	1.00[ASN][1000 genomes]
rs7095688	1.00[ASN][1000 genomes]
rs7097761	1.00[ASN][1000 genomes]
rs7098890	1.00[ASN][1000 genomes]
rs72816442	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816445	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816455	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816463	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816467	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816468	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816473	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816475	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816476	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816478	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816480	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816484	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818468	1.00[ASN][1000 genomes]
rs73267491	1.00[ASN][1000 genomes]
rs73267493	1.00[ASN][1000 genomes]
rs73269307	1.00[ASN][1000 genomes]
rs73269313	1.00[ASN][1000 genomes]
rs73269315	1.00[ASN][1000 genomes]
rs74155206	1.00[ASN][1000 genomes]
rs74155209	1.00[ASN][1000 genomes]
rs74155210	1.00[ASN][1000 genomes]
rs7894317	1.00[ASN][1000 genomes]
rs7894427	1.00[ASN][1000 genomes]
rs7917800	1.00[ASN][1000 genomes]
rs8677	1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61741800-61751000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr10:61745600-61750400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr10:61745800-61751000	Weak transcription	HMEC	breast
4	chr10:61746000-61751000	Weak transcription	NHEK	skin
5	chr10:61747800-61751000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr10:61749800-61752200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr10:61750000-61751000	Weak transcription	H1 Cell Line	embryonic stem cell

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