The 2.0 version of rSNPBase

Variant report

Variant rs7098890
Chromosome Location chr10:61575119-61575120
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61537600-61582800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr10:61549600-61579600 Strong transcription Primary B cells from cord blood blood
3 chr10:61556000-61583800 Strong transcription Primary B cells from peripheral blood blood
4 chr10:61563600-61577600 Weak transcription Right Atrium heart
5 chr10:61564200-61576800 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr10:61565400-61586600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr10:61567000-61593600 Weak transcription Small Intestine intestine
8 chr10:61567600-61579200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr10:61568200-61582400 Weak transcription Psoas Muscle Psoas
10 chr10:61571000-61576800 Weak transcription Fetal Intestine Small intestine
11 chr10:61571000-61591200 Weak transcription NHEK skin
12 chr10:61571200-61577600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr10:61571400-61579000 Weak transcription Brain Germinal Matrix brain
14 chr10:61571400-61628000 Weak transcription Spleen Spleen
15 chr10:61571600-61576200 Weak transcription Fetal Heart heart
16 chr10:61571600-61576800 Weak transcription Esophagus oesophagus
17 chr10:61571600-61576800 Weak transcription Fetal Muscle Leg muscle
18 chr10:61571600-61577000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr10:61571600-61577200 Weak transcription HSMMtube muscle
20 chr10:61571600-61577400 Weak transcription H9 Cell Line embryonic stem cell
21 chr10:61571600-61577400 Weak transcription Brain Angular Gyrus brain
22 chr10:61571600-61577400 Weak transcription Brain Inferior Temporal Lobe brain
23 chr10:61571600-61577400 Weak transcription Right Ventricle heart
24 chr10:61571600-61577600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr10:61571600-61577600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr10:61571600-61577600 Weak transcription Gastric stomach
27 chr10:61571600-61577600 Weak transcription Rectal Smooth Muscle rectum
28 chr10:61571600-61577800 Weak transcription Aorta Aorta
29 chr10:61571600-61577800 Weak transcription Thymus Thymus
30 chr10:61571600-61579200 Weak transcription Fetal Brain Male brain
31 chr10:61571600-61579400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr10:61571600-61579400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr10:61571600-61579800 Weak transcription Brain Substantia Nigra brain
34 chr10:61571600-61580600 Weak transcription Colon Smooth Muscle Colon
35 chr10:61571600-61580800 Weak transcription Brain Cingulate Gyrus brain
36 chr10:61571600-61582800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr10:61571600-61583600 Weak transcription GM12878-XiMat blood
38 chr10:61571600-61585400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr10:61571600-61585800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr10:61571600-61585800 Weak transcription Lung lung
41 chr10:61571600-61585800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr10:61571600-61595800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr10:61571600-61598400 Weak transcription Fetal Brain Female brain
44 chr10:61571600-61609200 Weak transcription NHLF lung
45 chr10:61571600-61616000 Weak transcription Fetal Kidney kidney
46 chr10:61571800-61576800 Weak transcription Fetal Stomach stomach
47 chr10:61571800-61577400 Weak transcription HSMM muscle
48 chr10:61571800-61583000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr10:61572000-61577200 Weak transcription A549 lung
50 chr10:61572000-61577600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015