Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10130623	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10131303	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10133531	0.83[ASN][1000 genomes]
rs10135443	1.00[ASN][1000 genomes]
rs10142381	0.91[ASN][1000 genomes]
rs10144394	0.88[ASN][1000 genomes]
rs10145082	0.83[ASN][1000 genomes]
rs10145446	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10149278	0.88[ASN][1000 genomes]
rs10151245	0.92[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11625077	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626015	0.88[ASN][1000 genomes]
rs11846851	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1570107	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17105664	0.88[ASN][1000 genomes]
rs28376370	0.83[ASN][1000 genomes]
rs28655994	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3784127	0.91[ASN][1000 genomes]
rs60145217	0.91[ASN][1000 genomes]
rs7142184	0.92[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73276276	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv832822	chr14:68874640-69060272	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68886600-68903200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:68895200-68914400	Weak transcription	A549	lung
3	chr14:68900600-68901400	Enhancers	Primary T cells fromperipheralblood	blood
4	chr14:68900600-68901400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr14:68900600-68901400	Enhancers	Fetal Thymus	thymus
6	chr14:68900800-68901400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr14:68900800-68901400	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr14:68900800-68901400	Enhancers	Primary B cells from peripheral blood	blood

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