The 2.0 version of rSNPBase

Variant report

Variant rs1168037
Chromosome Location chr1:62962423-62962424
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62909800-62977000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:62915400-62966600 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:62916000-62977200 Weak transcription Right Ventricle heart
4 chr1:62916200-62963200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr1:62916600-62976600 Weak transcription Psoas Muscle Psoas
6 chr1:62920000-62971000 Weak transcription Thymus Thymus
7 chr1:62920000-62980200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:62922600-62982000 Weak transcription A549 lung
9 chr1:62923200-62979200 Weak transcription Fetal Thymus thymus
10 chr1:62934400-62981200 Weak transcription Stomach Mucosa stomach
11 chr1:62938000-62966600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:62938800-62973800 Weak transcription Esophagus oesophagus
13 chr1:62939200-62978200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:62939600-62999800 Weak transcription Gastric stomach
15 chr1:62939600-63040600 Weak transcription Aorta Aorta
16 chr1:62939800-63044400 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:62939800-63060200 Weak transcription Small Intestine intestine
18 chr1:62941000-63001000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:62941600-62975400 Weak transcription NHLF lung
20 chr1:62941600-62978600 Weak transcription Rectal Smooth Muscle rectum
21 chr1:62941600-62981400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:62941600-62998200 Weak transcription Fetal Heart heart
23 chr1:62941600-63011800 Weak transcription Brain Hippocampus Middle brain
24 chr1:62941800-62972600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:62941800-62978400 Weak transcription NHEK skin
26 chr1:62941800-62982000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:62941800-62984600 Weak transcription Brain Cingulate Gyrus brain
28 chr1:62941800-63030200 Weak transcription Brain Angular Gyrus brain
29 chr1:62943600-62979400 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:62945400-62962800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:62947200-62970000 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:62947200-62978600 Weak transcription Ovary ovary
33 chr1:62947400-62970000 Weak transcription Brain Anterior Caudate brain
34 chr1:62951200-62980400 Weak transcription Primary monocytes fromperipheralblood blood
35 chr1:62952000-62963000 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:62953400-62962600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:62954000-63003400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
39 chr1:62956200-62962600 Strong transcription HUES64 Cell Line embryonic stem cell
40 chr1:62956200-62967200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:62956400-62964600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr1:62956600-62962600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:62957200-62977800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr1:62957800-62998200 Weak transcription Primary T cells from cord blood blood
45 chr1:62957800-63050200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:62958200-62964600 Weak transcription Fetal Intestine Small intestine
47 chr1:62958200-62965200 Weak transcription Fetal Stomach stomach
48 chr1:62958200-63010800 Weak transcription Brain Substantia Nigra brain
49 chr1:62958200-63061000 Weak transcription Lung lung
50 chr1:62958400-62968000 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015