The 2.0 version of rSNPBase

Variant report

Variant rs17123733
Chromosome Location chr1:63098940-63098941
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63036800-63113600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:63066800-63112200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:63074400-63099000 Weak transcription Brain Hippocampus Middle brain
4 chr1:63075600-63106600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:63075800-63099000 Weak transcription Fetal Brain Male brain
6 chr1:63079200-63099000 Weak transcription Brain Angular Gyrus brain
7 chr1:63079800-63108800 Weak transcription Primary B cells from cord blood blood
8 chr1:63082200-63099200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:63082200-63121000 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr1:63082800-63132600 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:63083400-63119000 Weak transcription Fetal Thymus thymus
12 chr1:63084800-63121000 Weak transcription Small Intestine intestine
13 chr1:63085400-63113600 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:63086400-63110600 Weak transcription Rectal Smooth Muscle rectum
15 chr1:63087800-63106200 Weak transcription Gastric stomach
16 chr1:63087800-63106600 Weak transcription Pancreas Pancrea
17 chr1:63088000-63105200 Weak transcription Fetal Heart heart
18 chr1:63088000-63105400 Weak transcription Hela-S3 cervix
19 chr1:63088000-63111400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:63088000-63134600 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:63088200-63101200 Weak transcription Stomach Mucosa stomach
22 chr1:63089200-63105200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:63089800-63099000 Weak transcription A549 lung
24 chr1:63092400-63099000 Weak transcription GM12878-XiMat blood
25 chr1:63092400-63101800 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr1:63093800-63100000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:63093800-63101000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:63094000-63106400 Weak transcription Brain Substantia Nigra brain
29 chr1:63094200-63099000 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr1:63094400-63099200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:63094600-63103600 Strong transcription NHDF-Ad bronchial
32 chr1:63094600-63106600 Weak transcription Right Ventricle heart
33 chr1:63094800-63100400 Strong transcription Dnd41 blood
34 chr1:63095000-63099000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:63095000-63099200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:63095000-63099600 Strong transcription Duodenum Smooth Muscle Duodenum
37 chr1:63095000-63099600 Strong transcription Fetal Lung lung
38 chr1:63095000-63102000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr1:63095000-63102000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:63095200-63099000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:63095200-63099200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:63095200-63099200 Strong transcription Duodenum Mucosa Duodenum
43 chr1:63095200-63099800 Strong transcription Adipose Nuclei Adipose
44 chr1:63095200-63099800 Strong transcription Rectal Mucosa Donor 31 rectum
45 chr1:63095200-63099800 Strong transcription HSMM muscle
46 chr1:63095200-63100600 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:63095400-63106600 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:63095600-63099000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:63095600-63099400 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr1:63095600-63099400 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015