The 2.0 version of rSNPBase

Variant report

Variant rs1748186
Chromosome Location chr1:63052651-63052652
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62939800-63060200 Weak transcription Small Intestine intestine
2 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
3 chr1:62958200-63061000 Weak transcription Lung lung
4 chr1:63000200-63054400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:63007200-63056200 Weak transcription Brain Anterior Caudate brain
6 chr1:63007200-63096200 Weak transcription HUVEC blood vessel
7 chr1:63008400-63053200 Weak transcription Osteobl bone
8 chr1:63010800-63078400 Weak transcription A549 lung
9 chr1:63017800-63057600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:63021600-63058800 Weak transcription Stomach Smooth Muscle stomach
11 chr1:63021600-63061400 Weak transcription Pancreas Pancrea
12 chr1:63024400-63053200 Weak transcription NH-A brain
13 chr1:63026400-63053400 Weak transcription Primary T cells from cord blood blood
14 chr1:63028800-63052800 Weak transcription Esophagus oesophagus
15 chr1:63035200-63053600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:63036800-63058600 Weak transcription Fetal Brain Female brain
17 chr1:63036800-63113600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:63037600-63055000 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:63038400-63054600 Weak transcription Fetal Kidney kidney
20 chr1:63038400-63087600 Weak transcription NHEK skin
21 chr1:63038400-63095600 Weak transcription Brain Germinal Matrix brain
22 chr1:63038600-63083000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:63038800-63053400 Weak transcription Duodenum Mucosa Duodenum
24 chr1:63039000-63063400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:63039200-63095200 Weak transcription Ovary ovary
26 chr1:63040400-63052800 Weak transcription Rectal Smooth Muscle rectum
27 chr1:63041000-63095200 Weak transcription Fetal Muscle Leg muscle
28 chr1:63041000-63095600 Weak transcription Fetal Stomach stomach
29 chr1:63041200-63053800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:63041400-63059000 Weak transcription Aorta Aorta
31 chr1:63042200-63083600 Weak transcription Fetal Muscle Trunk muscle
32 chr1:63042400-63056200 Weak transcription Adipose Nuclei Adipose
33 chr1:63043400-63056400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:63044000-63056000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:63044000-63076000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:63047600-63077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:63048400-63052800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:63050400-63052800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:63050400-63052800 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:63050600-63083800 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:63050800-63052800 Enhancers HUES48 Cell Line embryonic stem cell
42 chr1:63050800-63053000 Strong transcription NHDF-Ad bronchial
43 chr1:63050800-63053200 Weak transcription Brain Cingulate Gyrus brain
44 chr1:63051000-63052800 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:63051000-63066400 Weak transcription NHLF lung
46 chr1:63051400-63054000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:63051400-63059400 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr1:63051400-63062800 Weak transcription Psoas Muscle Psoas
49 chr1:63051800-63052800 Enhancers Liver Liver
50 chr1:63051800-63053000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015