Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10085663	0.91[CHB][hapmap];0.86[GIH][hapmap];0.90[JPT][hapmap]
rs1010497	0.91[CHB][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap]
rs10238396	0.91[CHB][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap]
rs10242162	0.86[CHB][hapmap];0.95[JPT][hapmap]
rs10242371	0.86[CHB][hapmap];0.95[JPT][hapmap]
rs10244106	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs10281844	0.84[JPT][hapmap]
rs10282152	0.84[JPT][hapmap]
rs11769986	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs12539965	0.95[CHB][hapmap];0.90[JPT][hapmap]
rs13247461	0.84[JPT][hapmap]
rs2058264	0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs4236614	0.86[CHB][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap]
rs4731061	0.91[CHB][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap]
rs55728082	0.82[ASN][1000 genomes]
rs56326140	0.85[ASN][1000 genomes]
rs60730410	0.84[ASN][1000 genomes]
rs6466820	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs6466826	0.86[CHB][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap]
rs6959051	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs6971737	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs6977209	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs6978199	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs73218224	0.86[ASN][1000 genomes]
rs73218225	0.86[ASN][1000 genomes]
rs73218228	0.86[ASN][1000 genomes]
rs73218235	0.81[ASN][1000 genomes]
rs740812	1.00[CEU][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs740813	0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs7780324	0.86[CHB][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap]
rs7786557	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3326794	chr7:122186590-122196256	Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122183200-122192400	Weak transcription	Fetal Lung	lung
2	chr7:122184400-122226000	Weak transcription	Left Ventricle	heart
3	chr7:122184600-122197400	Weak transcription	Lung	lung
4	chr7:122184800-122197200	Weak transcription	Pancreas	Pancrea
5	chr7:122187800-122196200	Weak transcription	Duodenum Mucosa	Duodenum
6	chr7:122188200-122194000	Weak transcription	Liver	Liver
7	chr7:122189000-122192400	Weak transcription	Fetal Heart	heart
8	chr7:122189000-122196600	Weak transcription	Colon Smooth Muscle	Colon

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