Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10085663	0.84[JPT][hapmap]
rs1010497	0.89[JPT][hapmap]
rs10238396	0.89[JPT][hapmap]
rs10242162	0.89[JPT][hapmap]
rs10242371	0.85[JPT][hapmap]
rs10244106	0.81[CEU][hapmap];0.89[JPT][hapmap]
rs10281844	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs10282152	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs11768210	1.00[CEU][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11769986	0.85[JPT][hapmap]
rs12539965	0.81[JPT][hapmap]
rs12668581	0.90[CHB][hapmap];0.94[YRI][hapmap]
rs13247461	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs2058264	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.95[ASN][1000 genomes]
rs2191276	0.90[CHB][hapmap];1.00[YRI][hapmap]
rs4236614	0.84[JPT][hapmap]
rs4731061	0.89[JPT][hapmap]
rs55728082	0.92[ASN][1000 genomes]
rs56326140	0.95[ASN][1000 genomes]
rs60730410	0.94[ASN][1000 genomes]
rs6466820	0.84[JPT][hapmap]
rs6466826	0.84[JPT][hapmap]
rs6959051	0.85[JPT][hapmap]
rs6971737	0.85[JPT][hapmap]
rs6977209	0.85[JPT][hapmap]
rs6978199	0.89[JPT][hapmap]
rs73218224	0.96[ASN][1000 genomes]
rs73218225	0.95[ASN][1000 genomes]
rs73218228	0.96[ASN][1000 genomes]
rs73218230	0.89[ASN][1000 genomes]
rs73218235	0.90[ASN][1000 genomes]
rs740813	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.95[ASN][1000 genomes]
rs7780324	0.84[JPT][hapmap]
rs7786557	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3326794	chr7:122186590-122196256	Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122183200-122192400	Weak transcription	Fetal Lung	lung
2	chr7:122184400-122226000	Weak transcription	Left Ventricle	heart
3	chr7:122184600-122197400	Weak transcription	Lung	lung
4	chr7:122184800-122197200	Weak transcription	Pancreas	Pancrea

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