Variant report
| Variant | rs11878444 |
|---|---|
| Chromosome Location | chr19:36430022-36430023 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:36427800-36433000 | Weak transcription | Small Intestine | intestine |
| 2 | chr19:36428000-36430200 | Flanking Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
| 3 | chr19:36428200-36431800 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 4 | chr19:36428800-36430200 | Weak transcription | Fetal Intestine Large | intestine |
| 5 | chr19:36428800-36430400 | Weak transcription | Aorta | Aorta |
| 6 | chr19:36428800-36437000 | Weak transcription | HSMMtube | muscle |
| 7 | chr19:36429000-36430400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 8 | chr19:36429000-36430400 | Weak transcription | Thymus | Thymus |
| 9 | chr19:36429000-36431600 | Weak transcription | Fetal Heart | heart |
| 10 | chr19:36429000-36438000 | Weak transcription | Osteobl | bone |
| 11 | chr19:36429200-36430400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 12 | chr19:36429200-36430400 | Enhancers | Pancreas | Pancrea |
| 13 | chr19:36429200-36430600 | Genic enhancers | Esophagus | oesophagus |
| 14 | chr19:36429200-36430600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 15 | chr19:36429200-36435000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 16 | chr19:36429200-36437000 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr19:36429200-36438600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 18 | chr19:36429400-36430200 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 19 | chr19:36429400-36430200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr19:36429400-36430200 | Weak transcription | Lung | lung |
| 21 | chr19:36429400-36430400 | Enhancers | Primary T cells fromperipheralblood | blood |
| 22 | chr19:36429400-36430400 | Transcr. at gene 5' and 3' | Brain Germinal Matrix | brain |
| 23 | chr19:36429400-36430800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr19:36429400-36430800 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 25 | chr19:36429400-36433000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 26 | chr19:36429400-36434800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 27 | chr19:36429400-36435400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 28 | chr19:36429400-36436200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 29 | chr19:36429400-36438000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 30 | chr19:36429400-36438000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 31 | chr19:36429400-36440000 | Weak transcription | A549 | lung |
| 32 | chr19:36429600-36430200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 33 | chr19:36429600-36430200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 34 | chr19:36429600-36430200 | Weak transcription | Brain Hippocampus Middle | brain |
| 35 | chr19:36429600-36430200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 36 | chr19:36429600-36430200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr19:36429600-36430200 | Weak transcription | NHLF | lung |
| 38 | chr19:36429600-36430400 | Enhancers | Fetal Brain Male | brain |
| 39 | chr19:36429600-36430400 | Weak transcription | Left Ventricle | heart |
| 40 | chr19:36429600-36430400 | Weak transcription | Ovary | ovary |
| 41 | chr19:36429600-36430400 | Weak transcription | Right Ventricle | heart |
| 42 | chr19:36429600-36430400 | Weak transcription | Spleen | Spleen |
| 43 | chr19:36429600-36430600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 44 | chr19:36429600-36430600 | Genic enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 45 | chr19:36429600-36430600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 46 | chr19:36429600-36431600 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 47 | chr19:36429600-36433000 | Weak transcription | Primary T cells from cord blood | blood |
| 48 | chr19:36429600-36433000 | Weak transcription | HepG2 | liver |
| 49 | chr19:36429600-36433800 | Strong transcription | Fetal Muscle Leg | muscle |
| 50 | chr19:36429600-36435400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
