The 2.0 version of rSNPBase

Variant report

Variant rs7252839
Chromosome Location chr19:36438254-36438255
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36429200-36438600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:36429400-36440000 Weak transcription A549 lung
3 chr19:36429600-36439600 Weak transcription Fetal Lung lung
4 chr19:36429600-36444200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr19:36429800-36438400 Weak transcription Muscle Satellite Cultured Cells --
6 chr19:36429800-36438600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr19:36429800-36438600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr19:36429800-36441000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr19:36430000-36450000 Weak transcription Right Atrium heart
10 chr19:36430800-36438400 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr19:36431800-36438600 Weak transcription Placenta Amnion Placenta Amnion
12 chr19:36431800-36440200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr19:36431800-36440400 Weak transcription H9 Cell Line embryonic stem cell
14 chr19:36431800-36442800 Weak transcription Thymus Thymus
15 chr19:36431800-36443000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr19:36432400-36440200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr19:36433600-36438400 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr19:36433600-36439200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr19:36433600-36444200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr19:36435200-36440000 Weak transcription Fetal Muscle Leg muscle
21 chr19:36435400-36438400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr19:36435400-36438600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr19:36435400-36438600 Weak transcription Duodenum Mucosa Duodenum
24 chr19:36435600-36441800 Weak transcription Brain Anterior Caudate brain
25 chr19:36435600-36444000 Weak transcription Dnd41 blood
26 chr19:36435800-36440200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:36435800-36440200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr19:36435800-36444000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr19:36435800-36444400 Weak transcription Gastric stomach
30 chr19:36436000-36444800 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr19:36436200-36438800 Weak transcription Ovary ovary
32 chr19:36436200-36439400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr19:36436200-36449000 Weak transcription Spleen Spleen
34 chr19:36436400-36440200 Weak transcription Primary T cells from cord blood blood
35 chr19:36436600-36438600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr19:36436600-36439000 Weak transcription Esophagus oesophagus
37 chr19:36436600-36439200 Weak transcription Pancreas Pancrea
38 chr19:36436600-36440200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr19:36436600-36440200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:36436600-36440200 Weak transcription Fetal Muscle Trunk muscle
41 chr19:36436600-36444800 Weak transcription Lung lung
42 chr19:36436600-36448200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr19:36436800-36438600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr19:36436800-36438600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr19:36436800-36438600 Weak transcription Brain Cingulate Gyrus brain
46 chr19:36436800-36438800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr19:36437000-36438800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr19:36437000-36440200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr19:36437400-36439800 Weak transcription Fetal Intestine Small intestine
50 chr19:36437600-36438600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015