The 2.0 version of rSNPBase

Variant report

Variant rs58768499
Chromosome Location chr19:36439789-36439790
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36429400-36440000 Weak transcription A549 lung
2 chr19:36429600-36444200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr19:36429800-36441000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr19:36430000-36450000 Weak transcription Right Atrium heart
5 chr19:36431800-36440200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:36431800-36440400 Weak transcription H9 Cell Line embryonic stem cell
7 chr19:36431800-36442800 Weak transcription Thymus Thymus
8 chr19:36431800-36443000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr19:36432400-36440200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr19:36433600-36444200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr19:36435200-36440000 Weak transcription Fetal Muscle Leg muscle
12 chr19:36435600-36441800 Weak transcription Brain Anterior Caudate brain
13 chr19:36435600-36444000 Weak transcription Dnd41 blood
14 chr19:36435800-36440200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:36435800-36440200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr19:36435800-36444000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr19:36435800-36444400 Weak transcription Gastric stomach
18 chr19:36436000-36444800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr19:36436200-36449000 Weak transcription Spleen Spleen
20 chr19:36436400-36440200 Weak transcription Primary T cells from cord blood blood
21 chr19:36436600-36440200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr19:36436600-36440200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr19:36436600-36440200 Weak transcription Fetal Muscle Trunk muscle
24 chr19:36436600-36444800 Weak transcription Lung lung
25 chr19:36436600-36448200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr19:36437000-36440200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr19:36437400-36439800 Weak transcription Fetal Intestine Small intestine
28 chr19:36437600-36445600 Weak transcription Fetal Brain Female brain
29 chr19:36438000-36441800 Weak transcription Brain Germinal Matrix brain
30 chr19:36438200-36440200 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr19:36438400-36440800 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr19:36438400-36441400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr19:36438800-36440000 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr19:36438800-36443000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr19:36438800-36443000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr19:36439000-36440000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr19:36439000-36440000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr19:36439000-36440200 Weak transcription Primary T cells fromperipheralblood blood
39 chr19:36439000-36440200 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr19:36439000-36443200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr19:36439000-36443800 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr19:36439200-36440200 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015