The 2.0 version of rSNPBase

Variant report

Variant rs7254298
Chromosome Location chr19:36432627-36432628
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36427800-36433000 Weak transcription Small Intestine intestine
2 chr19:36428800-36437000 Weak transcription HSMMtube muscle
3 chr19:36429000-36438000 Weak transcription Osteobl bone
4 chr19:36429200-36435000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr19:36429200-36437000 Weak transcription Psoas Muscle Psoas
6 chr19:36429200-36438600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:36429400-36433000 Weak transcription Fetal Muscle Trunk muscle
8 chr19:36429400-36434800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr19:36429400-36435400 Weak transcription Rectal Smooth Muscle rectum
10 chr19:36429400-36436200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr19:36429400-36438000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr19:36429400-36438000 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr19:36429400-36440000 Weak transcription A549 lung
14 chr19:36429600-36433000 Weak transcription Primary T cells from cord blood blood
15 chr19:36429600-36433000 Weak transcription HepG2 liver
16 chr19:36429600-36433800 Strong transcription Fetal Muscle Leg muscle
17 chr19:36429600-36435400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr19:36429600-36436200 Weak transcription NHEK skin
19 chr19:36429600-36436600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr19:36429600-36438000 Strong transcription Fetal Stomach stomach
21 chr19:36429600-36439600 Weak transcription Fetal Lung lung
22 chr19:36429600-36444200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr19:36429800-36433000 Weak transcription Brain Anterior Caudate brain
24 chr19:36429800-36435000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr19:36429800-36438000 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr19:36429800-36438000 Weak transcription Colon Smooth Muscle Colon
27 chr19:36429800-36438400 Weak transcription Muscle Satellite Cultured Cells --
28 chr19:36429800-36438600 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr19:36429800-36438600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr19:36429800-36441000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr19:36430000-36433000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:36430000-36433600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:36430000-36433600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr19:36430000-36450000 Weak transcription Right Atrium heart
35 chr19:36430200-36433600 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr19:36430200-36434000 Strong transcription Brain Hippocampus Middle brain
37 chr19:36430200-36436800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr19:36430400-36433600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr19:36430400-36435200 Weak transcription Fetal Brain Male brain
40 chr19:36430400-36435600 Strong transcription Dnd41 blood
41 chr19:36430600-36433600 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr19:36430600-36433600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr19:36430600-36436600 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr19:36430800-36438400 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr19:36431000-36438000 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr19:36431200-36433200 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr19:36431400-36435400 Weak transcription Fetal Intestine Large intestine
48 chr19:36431600-36433200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr19:36431600-36433200 Weak transcription Duodenum Mucosa Duodenum
50 chr19:36431600-36433200 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015