Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156159054..156161750-chr3:156163169..156166486,4	K562	blood:

Variant related genes	Relation type
ENSG00000242370	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10428085	0.92[CHB][hapmap];0.85[ASN][1000 genomes]
rs10513488	0.92[CHB][hapmap];0.92[JPT][hapmap];0.90[ASN][1000 genomes]
rs11924393	0.92[JPT][hapmap]
rs11924460	1.00[JPT][hapmap]
rs11928395	0.92[JPT][hapmap]
rs12496391	1.00[JPT][hapmap]
rs13317461	0.86[ASN][1000 genomes]
rs13317645	0.86[ASN][1000 genomes]
rs13324719	0.92[CHB][hapmap];0.85[ASN][1000 genomes]
rs13324766	0.85[CHB][hapmap];0.80[JPT][hapmap];0.85[ASN][1000 genomes]
rs13324809	0.92[CHB][hapmap];0.83[JPT][hapmap];0.85[ASN][1000 genomes]
rs16826160	1.00[CEU][hapmap]
rs3732515	0.92[CHB][hapmap];0.83[JPT][hapmap];0.86[ASN][1000 genomes]
rs3732516	0.93[CHB][hapmap];0.86[ASN][1000 genomes]
rs3821423	0.86[ASN][1000 genomes]
rs4574239	0.92[CHB][hapmap];0.86[ASN][1000 genomes]
rs55896573	0.86[ASN][1000 genomes]
rs61147236	0.86[ASN][1000 genomes]
rs6772280	0.92[JPT][hapmap]
rs6797279	0.86[ASN][1000 genomes]
rs7647302	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7650612	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156111200-156161600	Weak transcription	Aorta	Aorta
2	chr3:156150800-156160600	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr3:156157200-156164000	Enhancers	Rectal Smooth Muscle	rectum
4	chr3:156158000-156160600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr3:156160000-156162800	Enhancers	Colon Smooth Muscle	Colon
6	chr3:156160400-156160800	Weak transcription	Brain Cingulate Gyrus	brain
7	chr3:156160400-156161200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:156160400-156161600	Enhancers	HUVEC	blood vessel
9	chr3:156160400-156162200	Enhancers	Stomach Smooth Muscle	stomach

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