The 2.0 version of rSNPBase

Variant report

Variant rs11919184
Chromosome Location chr3:56757288-56757289
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56739400-56758600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr3:56752000-56758600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr3:56752000-56758800 Weak transcription Thymus Thymus
4 chr3:56752600-56758600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr3:56752600-56758600 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr3:56753000-56758600 Weak transcription HSMM muscle
7 chr3:56753200-56758800 Weak transcription Fetal Muscle Leg muscle
8 chr3:56753200-56759400 Weak transcription Brain Anterior Caudate brain
9 chr3:56753400-56766200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr3:56753600-56758000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr3:56753600-56759200 Weak transcription Fetal Stomach stomach
12 chr3:56753600-56763000 Weak transcription Brain Substantia Nigra brain
13 chr3:56753800-56758800 Weak transcription Primary hematopoietic stem cells blood
14 chr3:56753800-56760800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr3:56754200-56762200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr3:56754400-56758800 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr3:56754400-56762400 Weak transcription Brain Germinal Matrix brain
18 chr3:56754400-56783200 Weak transcription Stomach Mucosa stomach
19 chr3:56754600-56758600 Weak transcription Fetal Brain Female brain
20 chr3:56754600-56758800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr3:56754800-56760600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:56755000-56762200 Weak transcription Colon Smooth Muscle Colon
23 chr3:56755200-56760800 Weak transcription HepG2 liver
24 chr3:56755200-56781800 Weak transcription NH-A brain
25 chr3:56755400-56758200 Strong transcription Primary T cells from cord blood blood
26 chr3:56755400-56759000 Weak transcription Adipose Nuclei Adipose
27 chr3:56755400-56759000 Weak transcription Left Ventricle heart
28 chr3:56755600-56758600 Weak transcription Lung lung
29 chr3:56755600-56758800 Weak transcription Primary B cells from peripheral blood blood
30 chr3:56755600-56758800 Weak transcription Fetal Heart heart
31 chr3:56755600-56760400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr3:56755600-56762400 Weak transcription Rectal Smooth Muscle rectum
33 chr3:56755800-56757400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
34 chr3:56755800-56757600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr3:56755800-56758600 Weak transcription Fetal Kidney kidney
36 chr3:56755800-56758800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr3:56755800-56760600 Weak transcription Placenta Placenta
38 chr3:56755800-56761000 Weak transcription Ovary ovary
39 chr3:56755800-56762200 Weak transcription Pancreas Pancrea
40 chr3:56755800-56763000 Weak transcription Psoas Muscle Psoas
41 chr3:56756000-56758200 Weak transcription GM12878-XiMat blood
42 chr3:56756000-56762200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:56756200-56758400 Strong transcription Primary T cells fromperipheralblood blood
44 chr3:56756200-56758800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr3:56756200-56762400 Weak transcription Stomach Smooth Muscle stomach
46 chr3:56756400-56762400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:56756400-56767200 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr3:56756600-56757800 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr3:56756600-56758600 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr3:56756600-56759400 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015