The 2.0 version of rSNPBase

Variant report

Variant rs3924228
Chromosome Location chr3:56760744-56760745
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56753400-56766200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:56753600-56763000 Weak transcription Brain Substantia Nigra brain
3 chr3:56753800-56760800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr3:56754200-56762200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr3:56754400-56762400 Weak transcription Brain Germinal Matrix brain
6 chr3:56754400-56783200 Weak transcription Stomach Mucosa stomach
7 chr3:56755000-56762200 Weak transcription Colon Smooth Muscle Colon
8 chr3:56755200-56760800 Weak transcription HepG2 liver
9 chr3:56755200-56781800 Weak transcription NH-A brain
10 chr3:56755600-56762400 Weak transcription Rectal Smooth Muscle rectum
11 chr3:56755800-56761000 Weak transcription Ovary ovary
12 chr3:56755800-56762200 Weak transcription Pancreas Pancrea
13 chr3:56755800-56763000 Weak transcription Psoas Muscle Psoas
14 chr3:56756000-56762200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr3:56756200-56762400 Weak transcription Stomach Smooth Muscle stomach
16 chr3:56756400-56762400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:56756400-56767200 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr3:56756600-56766200 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr3:56756800-56781000 Weak transcription Fetal Intestine Large intestine
20 chr3:56757000-56786400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr3:56757200-56762600 Weak transcription Esophagus oesophagus
22 chr3:56757200-56767200 Strong transcription Fetal Muscle Trunk muscle
23 chr3:56757200-56767400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr3:56757400-56761400 Weak transcription HUVEC blood vessel
25 chr3:56757600-56761400 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr3:56757600-56792200 Weak transcription Hela-S3 cervix
27 chr3:56758000-56762400 Weak transcription HSMMtube muscle
28 chr3:56758000-56768600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr3:56758000-56768800 Weak transcription NHDF-Ad bronchial
30 chr3:56758400-56762600 Genic enhancers Primary T cells fromperipheralblood blood
31 chr3:56758600-56760800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr3:56758600-56761200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
33 chr3:56758600-56761200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr3:56758600-56762400 Genic enhancers Primary T helper cells fromperipheralblood blood
35 chr3:56758600-56762600 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr3:56758600-56764200 Strong transcription HMEC breast
37 chr3:56758600-56766800 Strong transcription HSMM muscle
38 chr3:56758600-56767000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr3:56758600-56767000 Strong transcription Lung lung
40 chr3:56758600-56792200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr3:56758800-56760800 Genic enhancers Primary B cells from peripheral blood blood
42 chr3:56758800-56762400 Genic enhancers Primary T helper cells PMA-I stimulated --
43 chr3:56758800-56763000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:56758800-56763200 Weak transcription Fetal Intestine Small intestine
45 chr3:56758800-56763600 Strong transcription Brain Inferior Temporal Lobe brain
46 chr3:56758800-56764800 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr3:56758800-56766400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr3:56758800-56766800 Strong transcription Fetal Muscle Leg muscle
49 chr3:56758800-56767000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr3:56758800-56767000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015