Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10518511	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10518514	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10518515	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10518517	0.86[EUR][1000 genomes]
rs11098918	0.86[EUR][1000 genomes]
rs1155135	0.89[ASN][1000 genomes]
rs12649215	0.99[ASN][1000 genomes]
rs12649568	0.86[EUR][1000 genomes]
rs12651138	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17012078	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17012097	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17012138	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17012147	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17012149	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1871736	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4274865	0.86[EUR][1000 genomes]
rs57081812	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57701757	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58916718	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59218603	0.86[EUR][1000 genomes]
rs59789711	0.86[EUR][1000 genomes]
rs72925363	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs755815	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353295	chr4:127994396-128017617	Enhancers Weak transcription ZNF genes & repeats	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128007400-128007800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr4:128007600-128008000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:128007600-128008200	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell

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