The 2.0 version of rSNPBase

Variant report

Variant rs12023699
Chromosome Location chr1:153942156-153942157
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153940400-153942200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:153940800-153944200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:153940800-153945600 Weak transcription Primary T cells from cord blood blood
4 chr1:153940800-153946200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:153940800-153947000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:153941000-153942400 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr1:153941000-153944000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr1:153941000-153944200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:153941000-153946000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:153941000-153946200 Weak transcription Small Intestine intestine
11 chr1:153941200-153944000 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:153941200-153944800 Weak transcription Brain Anterior Caudate brain
13 chr1:153941200-153944800 Weak transcription Rectal Smooth Muscle rectum
14 chr1:153941200-153944800 Weak transcription HSMM muscle
15 chr1:153941200-153945000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:153941200-153945000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:153941200-153945400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:153941200-153945400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:153941200-153945400 Weak transcription Brain Substantia Nigra brain
20 chr1:153941200-153945600 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:153941200-153945600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr1:153941200-153945600 Weak transcription Aorta Aorta
23 chr1:153941200-153945600 Weak transcription Brain Angular Gyrus brain
24 chr1:153941200-153945600 Weak transcription Colon Smooth Muscle Colon
25 chr1:153941200-153945600 Weak transcription Esophagus oesophagus
26 chr1:153941200-153945600 Weak transcription Left Ventricle heart
27 chr1:153941200-153945800 Weak transcription Ovary ovary
28 chr1:153941200-153945800 Weak transcription A549 lung
29 chr1:153941200-153945800 Weak transcription HSMMtube muscle
30 chr1:153941200-153946000 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:153941200-153946200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:153941200-153946200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:153941200-153946200 Weak transcription Colonic Mucosa Colon
34 chr1:153941200-153946400 Weak transcription NHDF-Ad bronchial
35 chr1:153941200-153948200 Weak transcription Stomach Mucosa stomach
36 chr1:153941200-153948600 Weak transcription Psoas Muscle Psoas
37 chr1:153941200-153949000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr1:153941400-153944000 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:153941400-153944600 Weak transcription Primary monocytes fromperipheralblood blood
40 chr1:153941400-153944600 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr1:153941400-153944600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:153941400-153944600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:153941400-153944800 Weak transcription Stomach Smooth Muscle stomach
44 chr1:153941400-153945000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:153941400-153945000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:153941400-153945000 Weak transcription Brain Hippocampus Middle brain
47 chr1:153941400-153945200 Weak transcription NHLF lung
48 chr1:153941400-153945400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:153941400-153945400 Weak transcription Brain Cingulate Gyrus brain
50 chr1:153941400-153945400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015