The 2.0 version of rSNPBase

Variant report

Variant rs12406003
Chromosome Location chr1:153900490-153900491
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153896400-153901400 Weak transcription Left Ventricle heart
2 chr1:153896400-153901400 Weak transcription Lung lung
3 chr1:153896400-153902400 Weak transcription Ovary ovary
4 chr1:153896400-153902600 Weak transcription Esophagus oesophagus
5 chr1:153896400-153903200 Weak transcription Psoas Muscle Psoas
6 chr1:153896600-153900800 Weak transcription Adipose Nuclei Adipose
7 chr1:153896600-153901400 Weak transcription Fetal Intestine Large intestine
8 chr1:153896600-153901600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:153896600-153901800 Weak transcription Fetal Muscle Trunk muscle
10 chr1:153896600-153902400 Weak transcription Right Ventricle heart
11 chr1:153896600-153902600 Weak transcription Aorta Aorta
12 chr1:153896600-153903400 Weak transcription Colonic Mucosa Colon
13 chr1:153896600-153906400 Weak transcription Small Intestine intestine
14 chr1:153896600-153906400 Weak transcription NH-A brain
15 chr1:153896600-153908200 Weak transcription Stomach Mucosa stomach
16 chr1:153896600-153908200 Weak transcription HSMM muscle
17 chr1:153896800-153900600 Weak transcription Primary T cells from cord blood blood
18 chr1:153896800-153900600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:153896800-153900600 Weak transcription Brain Angular Gyrus brain
20 chr1:153896800-153900800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:153896800-153900800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:153896800-153901000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:153896800-153901000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:153896800-153901000 Weak transcription Duodenum Mucosa Duodenum
25 chr1:153896800-153901000 Weak transcription Right Atrium heart
26 chr1:153896800-153901000 Weak transcription NHLF lung
27 chr1:153896800-153901200 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr1:153896800-153901200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:153896800-153901200 Weak transcription Stomach Smooth Muscle stomach
30 chr1:153896800-153901400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:153896800-153901400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr1:153896800-153901400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:153896800-153901400 Weak transcription Primary hematopoietic stem cells blood
34 chr1:153896800-153901400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:153896800-153901400 Weak transcription Brain Germinal Matrix brain
36 chr1:153896800-153901400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:153896800-153901400 Weak transcription Fetal Intestine Small intestine
38 chr1:153896800-153901400 Weak transcription Fetal Stomach stomach
39 chr1:153896800-153901400 Weak transcription Gastric stomach
40 chr1:153896800-153901400 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:153896800-153901400 Weak transcription Spleen Spleen
42 chr1:153896800-153901600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr1:153896800-153901600 Weak transcription Fetal Brain Female brain
44 chr1:153896800-153901600 Weak transcription Fetal Muscle Leg muscle
45 chr1:153896800-153901600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:153896800-153901600 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr1:153896800-153901600 Weak transcription A549 lung
48 chr1:153896800-153901800 Weak transcription Liver Liver
49 chr1:153896800-153902000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:153896800-153902000 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015