The 2.0 version of rSNPBase

Variant report

Variant rs6694061
Chromosome Location chr1:153834868-153834869
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153791800-153845600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:153800800-153835600 Weak transcription Ovary ovary
3 chr1:153800800-153850800 Weak transcription A549 lung
4 chr1:153800800-153852800 Weak transcription Fetal Brain Female brain
5 chr1:153800800-153852800 Weak transcription Placenta Placenta
6 chr1:153800800-153852800 Weak transcription Left Ventricle heart
7 chr1:153800800-153853000 Weak transcription Fetal Kidney kidney
8 chr1:153801600-153845800 Weak transcription Lung lung
9 chr1:153801800-153836600 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:153806200-153845400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr1:153814800-153835200 Weak transcription Osteobl bone
12 chr1:153814800-153839000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:153814800-153848000 Weak transcription Fetal Heart heart
14 chr1:153814800-153853400 Weak transcription HSMMtube muscle
15 chr1:153816000-153844000 Weak transcription Right Ventricle heart
16 chr1:153816600-153836200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:153821600-153839800 Weak transcription Small Intestine intestine
18 chr1:153822000-153836000 Weak transcription Liver Liver
19 chr1:153822000-153838600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:153822600-153839000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:153822600-153839400 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr1:153822800-153853400 Weak transcription HMEC breast
23 chr1:153822800-153854200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:153823600-153845400 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:153824000-153843600 Weak transcription Muscle Satellite Cultured Cells --
26 chr1:153825000-153840200 Weak transcription NHEK skin
27 chr1:153825200-153836600 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr1:153825200-153838800 Weak transcription Brain Hippocampus Middle brain
29 chr1:153825400-153836600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:153825600-153838800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:153825800-153836200 Weak transcription Pancreas Pancrea
32 chr1:153825800-153836600 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:153825800-153836600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:153825800-153838800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:153825800-153838800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr1:153825800-153838800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:153825800-153838800 Weak transcription Adipose Nuclei Adipose
38 chr1:153825800-153838800 Weak transcription Brain Anterior Caudate brain
39 chr1:153825800-153838800 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:153825800-153839000 Weak transcription Duodenum Mucosa Duodenum
41 chr1:153825800-153842000 Weak transcription Fetal Intestine Large intestine
42 chr1:153825800-153845800 Weak transcription Esophagus oesophagus
43 chr1:153825800-153852400 Weak transcription Fetal Lung lung
44 chr1:153825800-153853000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:153825800-153853000 Weak transcription Rectal Smooth Muscle rectum
46 chr1:153825800-153853200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:153825800-153853200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:153825800-153887200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:153826000-153836400 Weak transcription Hela-S3 cervix
50 chr1:153826000-153836600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015