Variant report

Variant rs6659220
Chromosome Location chr1:153868650-153868651
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153825800-153887200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:153837000-153893000 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:153846200-153894200 Weak transcription Esophagus oesophagus
4 chr1:153846400-153871600 Weak transcription Lung lung
5 chr1:153853800-153892200 Weak transcription Pancreas Pancrea
6 chr1:153853800-153893400 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:153854000-153869200 Weak transcription HepG2 liver
8 chr1:153854000-153892600 Weak transcription Colonic Mucosa Colon
9 chr1:153854400-153876200 Weak transcription Spleen Spleen
10 chr1:153854400-153892400 Weak transcription Aorta Aorta
11 chr1:153854600-153892200 Weak transcription HSMM muscle
12 chr1:153854800-153871200 Weak transcription Fetal Muscle Trunk muscle
13 chr1:153855000-153886800 Weak transcription Gastric stomach
14 chr1:153855000-153886800 Weak transcription Stomach Smooth Muscle stomach
15 chr1:153855000-153887200 Weak transcription Ovary ovary
16 chr1:153855000-153891800 Weak transcription NHEK skin
17 chr1:153855000-153892400 Weak transcription NHLF lung
18 chr1:153855000-153892800 Weak transcription NH-A brain
19 chr1:153855200-153871200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:153855200-153871200 Weak transcription Fetal Brain Female brain
21 chr1:153855200-153880600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:153855400-153870400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:153855400-153871200 Weak transcription Fetal Intestine Large intestine
24 chr1:153855400-153876400 Weak transcription Osteobl bone
25 chr1:153855400-153879600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:153855400-153892000 Weak transcription HMEC breast
27 chr1:153855600-153869800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr1:153855600-153871200 Weak transcription HUVEC blood vessel
29 chr1:153855600-153873600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:153855600-153892200 Weak transcription Fetal Kidney kidney
31 chr1:153855800-153869800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:153855800-153869800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:153856000-153871400 Weak transcription Brain Germinal Matrix brain
34 chr1:153856000-153890400 Weak transcription Brain Angular Gyrus brain
35 chr1:153856000-153891600 Weak transcription Rectal Smooth Muscle rectum
36 chr1:153859000-153873600 Strong transcription Fetal Thymus thymus
37 chr1:153860000-153890400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:153860200-153869200 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr1:153860200-153879400 Weak transcription A549 lung
40 chr1:153860400-153869400 Weak transcription Placenta Placenta
41 chr1:153860600-153870600 Weak transcription Psoas Muscle Psoas
42 chr1:153861200-153871000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:153861200-153891600 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr1:153861200-153892400 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr1:153861400-153873600 Weak transcription Brain Substantia Nigra brain
46 chr1:153861400-153877000 Weak transcription NHDF-Ad bronchial
47 chr1:153861400-153890800 Weak transcription Colon Smooth Muscle Colon
48 chr1:153861600-153869600 Weak transcription Liver Liver
49 chr1:153861600-153873000 Weak transcription Brain Anterior Caudate brain
50 chr1:153861600-153873600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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