The 2.0 version of rSNPBase

Variant report

Variant rs12026283
Chromosome Location chr1:63193913-63193914
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63187200-63195200 Weak transcription Fetal Stomach stomach
2 chr1:63187400-63198000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:63188600-63194200 Enhancers Cortex derived primary cultured neurospheres brain
4 chr1:63190200-63195800 Weak transcription Brain Cingulate Gyrus brain
5 chr1:63190400-63194800 Weak transcription Brain Angular Gyrus brain
6 chr1:63191200-63194600 Weak transcription Primary monocytes fromperipheralblood blood
7 chr1:63191200-63194800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr1:63191800-63194600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:63191800-63198000 Weak transcription Fetal Intestine Small intestine
10 chr1:63191800-63199400 Weak transcription Duodenum Mucosa Duodenum
11 chr1:63192000-63194000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:63192000-63194200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:63192000-63194200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:63192000-63194400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr1:63192000-63194800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:63192000-63194800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr1:63192000-63197800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:63192000-63201200 Weak transcription Colon Smooth Muscle Colon
19 chr1:63192200-63194600 Weak transcription HepG2 liver
20 chr1:63192200-63194800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:63192200-63198000 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr1:63193200-63194000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:63193400-63194000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:63193400-63194000 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr1:63193400-63194000 Enhancers Brain Germinal Matrix brain
26 chr1:63193400-63194000 Enhancers NHDF-Ad bronchial
27 chr1:63193400-63194000 Enhancers NHLF lung
28 chr1:63193400-63194200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:63193400-63194200 Enhancers Brain Anterior Caudate brain
30 chr1:63193600-63194000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:63193600-63198000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:63193800-63194200 Enhancers Osteobl bone
33 chr1:63193800-63194800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:63193800-63194800 Weak transcription Stomach Mucosa stomach
35 chr1:63193800-63195000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:63193800-63197000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:63193800-63197800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:63193800-63198000 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:63193800-63201400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015