Variant report

Variant	rs12027341
Chromosome Location	chr1:63203906-63203907
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10159255	1.00[JPT][hapmap]
rs10789118	1.00[JPT][hapmap]
rs10789119	1.00[JPT][hapmap]
rs10789123	0.90[EUR][1000 genomes]
rs10889352	1.00[JPT][hapmap]
rs10889353	1.00[JPT][hapmap]
rs10889356	0.80[ASN][1000 genomes]
rs10889357	0.84[ASN][1000 genomes]
rs10889360	0.84[ASN][1000 genomes]
rs10889364	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11207981	0.81[JPT][hapmap]
rs11207992	1.00[JPT][hapmap]
rs11207995	1.00[JPT][hapmap]
rs11207998	0.92[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]
rs11208004	1.00[JPT][hapmap]
rs11208007	0.81[ASN][1000 genomes]
rs11485618	1.00[JPT][hapmap]
rs1168023	0.81[JPT][hapmap]
rs1168086	0.88[JPT][hapmap]
rs12023282	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12024044	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12025111	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12026283	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12028944	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12029452	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12031537	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12041843	0.91[ASN][1000 genomes]
rs12042319	1.00[JPT][hapmap]
rs12043910	0.95[ASN][1000 genomes]
rs12048208	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs12049254	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12116574	1.00[JPT][hapmap]
rs12121288	0.90[EUR][1000 genomes]
rs12136083	0.84[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12563557	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1570694	1.00[JPT][hapmap]
rs1781221	0.81[JPT][hapmap]
rs2029763	1.00[JPT][hapmap]
rs3850634	1.00[JPT][hapmap]
rs4587594	1.00[JPT][hapmap]
rs4630152	0.88[EUR][1000 genomes]
rs4915624	0.86[EUR][1000 genomes]
rs6664692	0.89[EUR][1000 genomes]
rs72915166	0.85[EUR][1000 genomes]
rs7517372	0.88[EUR][1000 genomes]
rs7518497	0.84[ASN][1000 genomes]
rs995000	1.00[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:63200200-63210600	Weak transcription	Fetal Stomach	stomach
2	chr1:63200200-63212200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr1:63202000-63210800	Weak transcription	HepG2	liver

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